Assay Details
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv4n111 | Chr.1:869076 - 914637 on Build GRCh38 | Duplication | LOC284600 FAM41C |
nsv1004962 | Chr.1:629241 - 915295 on Build GRCh38 | Gain | LOC284600 MTND2P28 MTND1P23 OR4F16 LOC100288069 LINC01128 LOC107984841 MIR6723 LINC00115 LOC100133331 LOC100287934 FAM87B FAM41C |
nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss | MMP23A B3GALT6 ATAD3C LOC107985728 SLC35E2B LOC105378949 CCNL2 MTND2P28 LOC100134822 TNFRSF4 DVL1 SKI FAAP20 ACAP3 PERM1 AURKAIP1 CPSF3L TMEM52 LOC100129534 ATAD3A LOC101928626 MIR200B OR4F16 CDK11B TMEM88B ISG15 MIR200A LOC148413 CALML6 LOC105378592 CFAP74 WASH7P LOC100288175 UBE2J2 MIR6859-2 VWA1 SDF4 CPTP ATAD3B MIR6808 ANKRD65 AGRN LOC100506504 LOC100288069 FNDC10 LINC01128 GNB1 LOC102724312 LOC107985729 TTLL10 TAS1R3 LOC100287934 OR4F5 FAM138A MIB2 FAM41C NOC2L LOC102725121 PLEKHN1 DDX11L1 SCNN1D CDK11A PUSL1 SLC35E2 HES4 GABRD MRPL20 MIR429 LINC00115 MXRA8 OR4F29 MIR6727 TMEM240 SSU72 MIR6726 MMP23B LOC105378589 LOC284600 MTND1P23 LOC100130417 KLHL17 LOC100132287 LOC105378948 NADK RNF223 C1orf159 MIR1302-2 LOC729737 LOC107984841 SAMD11 LINC01342 FAM132A PRKCZ MIR6859-1 TTLL10-AS1 TNFRSF18 LOC105378947 LOC105378591 MIR6723 LOC100133331 MORN1 FAM87B |
nsv950451 | Chr.1:899421 - 1094520 on Build GRCh38 | Deletion | NOC2L LOC284600 AGRN LOC100288175 LOC100130417 PLEKHN1 KLHL17 ISG15 LOC105378948 PERM1 HES4 LOC107985728 RNF223 C1orf159 SAMD11 |
nsv509035 | Chr.1:891406 - 985724 on Build GRCh38 | Insertion | LOC107985728 NOC2L LOC284600 LOC100130417 PLEKHN1 KLHL17 SAMD11 PERM1 |
dgv1n67 | Chr.1:811028 - 914557 on Build GRCh38 | Gain | LOC284600 LINC00115 LINC01128 FAM87B FAM41C |
nsv1005935 | Chr.1:805477 - 915295 on Build GRCh38 | Gain | LOC284600 LINC00115 LINC01128 FAM87B FAM41C |
esv3584982 | Chr.1:837710 - 917284 on Build GRCh38 | Gain | LOC284600 LOC100130417 LINC01128 FAM41C |
nsv1009537 | Chr.1:841742 - 915295 on Build GRCh38 | Gain | LOC284600 LINC01128 FAM41C |
nsv428334 | Chr.1:874371 - 1220569 on Build GRCh38 | Gain | LOC284600 AGRN LOC100130417 KLHL17 ISG15 LOC105378948 MIR200A LOC107985728 RNF223 TTLL10 C1orf159 SAMD11 FAM41C NOC2L LINC01342 TNFRSF4 LOC100288175 PLEKHN1 TTLL10-AS1 PERM1 HES4 TNFRSF18 SDF4 MIR429 MIR200B |
nsv10161 | Chr.1:776731 - 1777210 on Build GRCh38 | Gain+Loss | AGRN MMP23A LOC100288069 FNDC10 B3GALT6 LINC01128 ATAD3C LOC102724312 LOC107985729 LOC107985728 SLC35E2B TTLL10 TAS1R3 LOC100287934 CCNL2 MIB2 FAM41C NOC2L TNFRSF4 DVL1 PLEKHN1 SCNN1D ACAP3 PERM1 CDK11A PUSL1 AURKAIP1 SLC35E2 HES4 CPSF3L MRPL20 MIR429 LINC00115 MXRA8 ATAD3A MIR6727 MIR200B TMEM240 SSU72 MIR6726 MMP23B LOC284600 CDK11B LOC100130417 TMEM88B KLHL17 ISG15 LOC105378948 MIR200A NADK LOC148413 RNF223 C1orf159 SAMD11 LINC01342 FAM132A LOC100288175 UBE2J2 TTLL10-AS1 TNFRSF18 VWA1 SDF4 CPTP ATAD3B MIR6808 ANKRD65 FAM87B |
dgv5n100 | Chr.1:585989 - 1114424 on Build GRCh38 | Gain | LOC284600 AGRN MTND1P23 OR4F16 LOC100130417 KLHL17 ISG15 LOC105378948 LOC100288069 LINC01128 LOC107985728 RNF223 C1orf159 LOC107984841 SAMD11 LOC100287934 FAM41C NOC2L MTND2P28 LOC100288175 PLEKHN1 PERM1 HES4 LOC105378947 MIR6723 LINC00115 LOC100133331 LOC101928626 FAM87B |
nsv517709 | Chr.1:817186 - 1275912 on Build GRCh38 | Gain+Loss | LOC284600 AGRN LOC100130417 KLHL17 ISG15 LOC105378948 B3GALT6 MIR200A LINC01128 LOC107985728 RNF223 TTLL10 C1orf159 SAMD11 FAM41C NOC2L LINC01342 FAM132A TNFRSF4 LOC100288175 UBE2J2 PLEKHN1 TTLL10-AS1 PERM1 HES4 TNFRSF18 SDF4 MIR429 LINC00115 FAM87B MIR200B |
dgv1n111 | Chr.1:690090 - 939522 on Build GRCh38 | Duplication | LOC284600 OR4F16 LOC100130417 LOC100288069 LINC01128 LOC107985728 LOC107984841 LINC00115 LOC100133331 SAMD11 LOC100287934 FAM87B FAM41C |
dgv3n111 | Chr.1:783283 - 939522 on Build GRCh38 | Duplication | LOC107985728 LOC284600 LOC100130417 LINC00115 SAMD11 LOC100287934 LINC01128 FAM87B FAM41C |
dgv2n67 | Chr.1:877618 - 1426500 on Build GRCh38 | Gain | MIR6726 LOC284600 AGRN LOC100130417 TMEM88B KLHL17 ISG15 LOC105378948 B3GALT6 MIR200A LOC148413 LOC107985728 RNF223 TTLL10 C1orf159 TAS1R3 SAMD11 CCNL2 NOC2L LINC01342 FAM132A TNFRSF4 LOC100288175 DVL1 UBE2J2 PLEKHN1 SCNN1D TTLL10-AS1 ACAP3 PERM1 PUSL1 AURKAIP1 HES4 CPSF3L TNFRSF18 MRPL20 SDF4 CPTP MIR429 MXRA8 MIR6808 MIR6727 ANKRD65 MIR200B |
nsv832980 | Chr.1:848279 - 1007037 on Build GRCh38 | Gain | LOC107985728 NOC2L LOC284600 LOC100130417 PLEKHN1 KLHL17 SAMD11 LINC01128 PERM1 HES4 FAM41C |
esv3584976 | Chr.1:733250 - 914824 on Build GRCh38 | Gain | LOC284600 LOC107984841 LINC00115 LOC100288069 LOC100287934 LINC01128 FAM87B FAM41C |