Assay Details
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv4n111 | Chr.1:869076 - 914637 on Build GRCh38 | Duplication | LOC284600 FAM41C |
nsv1004962 | Chr.1:629241 - 915295 on Build GRCh38 | Gain | MIR6723 LINC01128 LOC100133331 LINC00115 MTND1P23 LOC100287934 FAM87B LOC284600 FAM41C MTND2P28 OR4F16 LOC100288069 LOC107984841 |
nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss | LOC105378949 ATAD3B CFAP74 LINC01128 LOC729737 NADK LINC00115 LOC284600 SDF4 MTND2P28 LOC105378592 UBE2J2 TAS1R3 FAM138A C1orf159 TMEM240 GABRD LOC105378948 TNFRSF18 DVL1 TMEM52 CDK11B LOC100288175 FAM41C MRPL20 TMEM88B CPSF3L FAAP20 VWA1 PLEKHN1 MORN1 CCNL2 SKI AGRN LOC100288069 RNF223 LOC102724312 MIR6859-2 MIR6726 ISG15 SLC35E2B MIR200A MTND1P23 LOC100287934 LOC148413 LOC100130417 CDK11A FNDC10 PUSL1 SCNN1D SSU72 TNFRSF4 B3GALT6 SAMD11 LOC100129534 LOC100506504 DDX11L1 FAM87B LOC100134822 LOC105378589 MMP23A MIR200B AURKAIP1 NOC2L PERM1 OR4F29 PRKCZ LOC100133331 OR4F5 CALML6 SLC35E2 LOC100132287 LOC107984841 HES4 MIR6723 MIR1302-2 MIR6808 ANKRD65 LINC01342 MMP23B LOC107985729 LOC105378947 TTLL10-AS1 KLHL17 ATAD3C LOC102725121 ACAP3 LOC105378591 ATAD3A WASH7P MIB2 MIR6859-1 TTLL10 GNB1 CPTP MXRA8 MIR6727 MIR429 LOC107985728 LOC101928626 FAM132A OR4F16 |
nsv509035 | Chr.1:891406 - 985724 on Build GRCh38 | Insertion | PERM1 LOC284600 PLEKHN1 KLHL17 LOC100130417 SAMD11 LOC107985728 NOC2L |
dgv1n67 | Chr.1:811028 - 914557 on Build GRCh38 | Gain | FAM87B LOC284600 FAM41C LINC01128 LINC00115 |
nsv1005935 | Chr.1:805477 - 915295 on Build GRCh38 | Gain | FAM87B LOC284600 FAM41C LINC01128 LINC00115 |
esv3584982 | Chr.1:837710 - 917284 on Build GRCh38 | Gain | LOC284600 FAM41C LOC100130417 LINC01128 |
nsv1009537 | Chr.1:841742 - 915295 on Build GRCh38 | Gain | LOC284600 FAM41C LINC01128 |
nsv428334 | Chr.1:874371 - 1220569 on Build GRCh38 | Gain | PLEKHN1 HES4 TNFRSF4 SAMD11 LINC01342 LOC284600 SDF4 AGRN MIR200B C1orf159 NOC2L TTLL10-AS1 RNF223 PERM1 KLHL17 ISG15 LOC105378948 TNFRSF18 MIR200A LOC100288175 TTLL10 FAM41C LOC100130417 MIR429 LOC107985728 |
nsv10161 | Chr.1:776731 - 1777210 on Build GRCh38 | Gain+Loss | ATAD3B TNFRSF4 B3GALT6 SAMD11 LINC01128 NADK LINC00115 FAM87B LOC284600 SDF4 UBE2J2 MMP23A TAS1R3 MIR200B AURKAIP1 C1orf159 NOC2L PERM1 TMEM240 LOC105378948 TNFRSF18 DVL1 CDK11B LOC100288175 FAM41C MRPL20 SLC35E2 TMEM88B CPSF3L VWA1 PLEKHN1 HES4 MIR6808 ANKRD65 LINC01342 CCNL2 MMP23B AGRN LOC107985729 LOC100288069 TTLL10-AS1 RNF223 LOC102724312 MIR6726 KLHL17 ISG15 ATAD3C ACAP3 ATAD3A SLC35E2B MIB2 MIR200A LOC100287934 LOC148413 TTLL10 LOC100130417 CPTP MXRA8 MIR6727 CDK11A FNDC10 MIR429 PUSL1 LOC107985728 FAM132A SCNN1D SSU72 |
dgv5n100 | Chr.1:585989 - 1114424 on Build GRCh38 | Gain | PLEKHN1 HES4 SAMD11 MIR6723 LINC01128 LINC00115 FAM87B LOC284600 AGRN MTND2P28 LOC105378947 LOC100288069 C1orf159 NOC2L RNF223 PERM1 KLHL17 ISG15 LOC105378948 LOC100133331 MTND1P23 LOC100288175 LOC100287934 FAM41C LOC100130417 LOC107985728 LOC101928626 OR4F16 LOC107984841 |
nsv517709 | Chr.1:817186 - 1275912 on Build GRCh38 | Gain+Loss | PLEKHN1 HES4 TNFRSF4 B3GALT6 SAMD11 LINC01128 LINC01342 LINC00115 FAM87B LOC284600 SDF4 AGRN UBE2J2 MIR200B C1orf159 NOC2L TTLL10-AS1 RNF223 PERM1 KLHL17 ISG15 LOC105378948 TNFRSF18 MIR200A LOC100288175 TTLL10 FAM41C LOC100130417 MIR429 LOC107985728 FAM132A |
dgv1n111 | Chr.1:690090 - 939522 on Build GRCh38 | Duplication | SAMD11 LINC01128 LOC100133331 LINC00115 LOC100287934 FAM87B LOC284600 FAM41C LOC100130417 LOC107985728 OR4F16 LOC100288069 LOC107984841 |
dgv3n111 | Chr.1:783283 - 939522 on Build GRCh38 | Duplication | LOC100287934 FAM87B LOC284600 FAM41C LOC100130417 SAMD11 LOC107985728 LINC01128 LINC00115 |
dgv2n67 | Chr.1:877618 - 1426500 on Build GRCh38 | Gain | PLEKHN1 HES4 TNFRSF4 B3GALT6 SAMD11 MIR6808 ANKRD65 LINC01342 CCNL2 LOC284600 SDF4 AGRN UBE2J2 TAS1R3 MIR200B AURKAIP1 C1orf159 NOC2L TTLL10-AS1 RNF223 MIR6726 PERM1 KLHL17 ISG15 LOC105378948 ACAP3 TNFRSF18 DVL1 MIR200A LOC100288175 LOC148413 TTLL10 MRPL20 LOC100130417 TMEM88B CPTP CPSF3L MXRA8 MIR6727 MIR429 PUSL1 LOC107985728 FAM132A SCNN1D |
nsv832980 | Chr.1:848279 - 1007037 on Build GRCh38 | Gain | PERM1 LOC284600 PLEKHN1 HES4 KLHL17 FAM41C LOC100130417 SAMD11 LOC107985728 LINC01128 NOC2L |
esv2762129 | Chr.1:771719 - 901705 on Build GRCh38 | Gain | LOC100287934 FAM87B FAM41C LINC01128 LOC100288069 LINC00115 |
esv3584976 | Chr.1:733250 - 914824 on Build GRCh38 | Gain | LOC100287934 FAM87B LOC284600 FAM41C LINC01128 LOC100288069 LOC107984841 LINC00115 |