Assay Details
Target Gene Details
Entrez Gene ID: | 23463 |
Gene Name: | isoprenylcysteine carboxyl methyltransferase |
Gene Aliases: |
HSTE14, MST098, MSTP098, PCCMT, PCMT, PPMT |
Location: |
Chr.1:6221193-6235984 on Build GRCh38 |
Assay Gene Location: | Within Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ICMT | NM_012405.3 | NP_036537.1 | ||
XM_011541140.2 | XP_011539442.1 | |||
AF064084.1 | AAC16554.1 | |||
AK092890.1 | ||||
BC028168.1 | AAH28168.1 | |||
CR541671.1 | CAG46472.1 | |||
CR541711.1 | CAG46512.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv8n67 | Chr.1:6220621 - 6264303 on Build GRCh38 | Gain | ICMT LINC00337 ACOT7 GPR153 HES3 RNF207 |
nsv831425 | Chr.1:6129291 - 6264418 on Build GRCh38 | Loss | ICMT LINC00337 ACOT7 GPR153 RPL22 CHD5 LOC102724450 HES3 RNF207 |
nsv545236 | Chr.1:6161915 - 6262876 on Build GRCh38 | Loss | ICMT LINC00337 GPR153 RPL22 CHD5 LOC102724450 HES3 RNF207 |
nsv508825 | Chr.1:6221275 - 6286549 on Build GRCh38 | Insertion | ICMT LINC00337 ACOT7 GPR153 HES3 RNF207 |
More Information
Additional Information:
For this assay, SNP(s) [rs77161736] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |