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Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:966127 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03355250_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 XM_006710944.3 1 308 XP_006711007.2
XM_011542248.2 1 308 XP_011540550.2
XM_017002474.1 1 308 XP_016857963.1
XM_017002475.1 1 308 XP_016857964.1
XM_017002476.1 1 308 XP_016857965.1
XM_017002477.1 1 308 XP_016857966.1
XM_017002478.1 1 308 XP_016857967.1
XM_017002479.1 1 308 XP_016857968.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain PLEKHN1 C1orf159 LOC105378948 ISG15 LOC107985728 SAMD11 NOC2L AGRN KLHL17 LOC100130417 PERM1 LOC100288175 RNF223 HES4 LOC284600
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss UBE2J2 LOC729737 GNB1 LOC105378589 FAAP20 LOC100288175 LOC107985729 MIR6859-1 LINC00115 MORN1 LOC284600 MRPL20 LOC100129534 MMP23B LOC100287934 OR4F29 FAM138A CPSF3L DVL1 MIR6726 AGRN OR4F16 WASH7P MTND2P28 MMP23A TNFRSF18 CFAP74 TMEM52 SLC35E2B HES4 FAM41C MXRA8 MIR6859-2 NADK ISG15 LOC105378947 NOC2L LOC102724312 B3GALT6 LOC107984841 MTND1P23 LOC105378949 TMEM88B SLC35E2 MIR200B FAM132A ATAD3C DDX11L1 TAS1R3 SKI MIR6808 TNFRSF4 ANKRD65 CDK11A CCNL2 LOC105378592 MIB2 RNF223 LOC100506504 LOC148413 C1orf159 CDK11B MIR6727 KLHL17 LINC01342 MIR429 FAM87B TTLL10-AS1 LINC01128 LOC100132287 LOC102725121 CALML6 PUSL1 ATAD3A GABRD LOC101928626 AURKAIP1 FNDC10 MIR1302-2 TTLL10 SDF4 LOC100133331 PLEKHN1 LOC105378948 TMEM240 LOC100288069 MIR200A LOC107985728 SAMD11 ACAP3 CPTP SCNN1D LOC100134822 VWA1 SSU72 LOC100130417 PERM1 ATAD3B OR4F5 LOC105378591 MIR6723 PRKCZ
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion PLEKHN1 C1orf159 LOC105378948 ISG15 LOC107985728 SAMD11 NOC2L AGRN KLHL17 LOC100130417 PERM1 LOC100288175 RNF223 HES4 LOC284600
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion PLEKHN1 LOC100130417 PERM1 LOC107985728 SAMD11 NOC2L LOC284600 KLHL17
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain MIR200B AGRN TTLL10 TNFRSF4 SDF4 LOC100288175 TNFRSF18 RNF223 HES4 FAM41C PLEKHN1 C1orf159 LOC105378948 ISG15 MIR200A LOC107985728 SAMD11 NOC2L KLHL17 LINC01342 MIR429 LOC100130417 PERM1 TTLL10-AS1 LOC284600
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MIR200B FAM132A ATAD3C TAS1R3 UBE2J2 MIR6808 TNFRSF4 ANKRD65 LOC100288175 CDK11A CCNL2 MIB2 LOC107985729 RNF223 LOC148413 C1orf159 LINC00115 CDK11B MIR6727 KLHL17 LINC01342 MIR429 FAM87B TTLL10-AS1 LINC01128 LOC284600 PUSL1 MRPL20 ATAD3A AURKAIP1 MMP23B LOC100287934 CPSF3L DVL1 FNDC10 MIR6726 AGRN TTLL10 SDF4 MMP23A TNFRSF18 SLC35E2B HES4 FAM41C PLEKHN1 MXRA8 LOC105378948 NADK TMEM240 ISG15 LOC100288069 MIR200A LOC107985728 SAMD11 ACAP3 CPTP NOC2L SCNN1D VWA1 SSU72 LOC102724312 B3GALT6 LOC100130417 PERM1 ATAD3B TMEM88B SLC35E2
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC101928626 LOC100287934 AGRN OR4F16 MTND2P28 LOC100288175 RNF223 HES4 LOC100133331 FAM41C PLEKHN1 C1orf159 LOC105378948 ISG15 LINC00115 LOC100288069 LOC105378947 LOC107985728 SAMD11 NOC2L KLHL17 LOC100130417 FAM87B PERM1 LOC107984841 MIR6723 LINC01128 MTND1P23 LOC284600
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss MIR200B FAM132A UBE2J2 AGRN TTLL10 TNFRSF4 SDF4 LOC100288175 TNFRSF18 RNF223 HES4 FAM41C PLEKHN1 C1orf159 LOC105378948 ISG15 LINC00115 MIR200A LOC107985728 SAMD11 NOC2L KLHL17 LINC01342 MIR429 B3GALT6 LOC100130417 FAM87B PERM1 TTLL10-AS1 LINC01128 LOC284600
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain PLEKHN1 C1orf159 LOC105378948 ISG15 SAMD11 NOC2L AGRN KLHL17 LINC01342 PERM1 LOC100288175 RNF223 HES4
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion PLEKHN1 MIR200B C1orf159 LOC105378948 ISG15 MIR200A SAMD11 NOC2L AGRN KLHL17 LINC01342 MIR429 TTLL10 TNFRSF4 PERM1 SDF4 LOC100288175 TNFRSF18 TTLL10-AS1 RNF223 HES4
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss PLEKHN1 LOC100130417 PERM1 ISG15 LOC107985728 SAMD11 HES4 NOC2L LOC284600 AGRN KLHL17
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MIR200B FAM132A AURKAIP1 TAS1R3 CPSF3L UBE2J2 DVL1 MIR6726 AGRN MIR6808 TTLL10 TNFRSF4 ANKRD65 SDF4 LOC100288175 CCNL2 TNFRSF18 RNF223 HES4 LOC148413 PLEKHN1 C1orf159 MXRA8 LOC105378948 ISG15 MIR200A LOC107985728 SAMD11 ACAP3 CPTP NOC2L SCNN1D MIR6727 KLHL17 LINC01342 MIR429 B3GALT6 LOC100130417 PERM1 TTLL10-AS1 LOC284600 PUSL1 MRPL20 TMEM88B
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain PLEKHN1 LOC100130417 PERM1 LINC01128 LOC107985728 SAMD11 HES4 NOC2L LOC284600 KLHL17 FAM41C

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Process(es)


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