Assay Details
Target Gene Details
Entrez Gene ID: | 64129 |
Gene Name: | tubulointerstitial nephritis antigen like 1 |
Gene Aliases: |
ARG1, LCN7, LIECG3, TINAGRP |
Location: |
Chr.1:31576384-31587686 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TINAGL1 | NM_001204414.1 | NP_001191343.1 | ||
NM_001204415.1 | NP_001191344.1 | |||
NM_022164.2 | NP_071447.1 | |||
XM_005271106.2 | XP_005271163.1 | |||
XM_005271107.2 | XP_005271164.1 | |||
XM_011541946.1 | XP_011540248.1 | |||
AB050716.1 | BAB18636.1 | |||
AF205436.1 | AAG33699.1 | |||
AF236150.1 | AAG38876.1 | |||
AK074124.1 | BAB84950.1 | |||
AK075398.1 | BAC11596.1 | |||
AK292770.1 | ||||
AK296322.1 | ||||
AK298038.1 | ||||
AK298382.1 | ||||
AK301070.1 | ||||
AY358421.1 | AAQ88787.1 | |||
BC064633.1 | AAH64633.1 | |||
BM923842.1 | ||||
DA656570.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv10062 | Chr.1:31571300 - 31623381 on Build GRCh38 | Gain+Loss | HCRTR1 TINAGL1 |
nsv1011229 | Chr.1:31566071 - 31606805 on Build GRCh38 | Loss | TINAGL1 |
nsv950384 | Chr.1:31571200 - 31588799 on Build GRCh38 | Deletion | TINAGL1 |
esv2758930 | Chr.1:31209533 - 32000730 on Build GRCh38 | Loss | ADGRB2 PEF1 MIR4254 LINC01225 FABP3 SERINC2 LINC01226 HCRTR1 TINAGL1 SNRNP40 COL16A1 SPOCD1 ZCCHC17 NKAIN1 PTP4A2 |
More Information
Additional Information:
For this assay, SNP(s) [rs114434987] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |