Assay Details
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1112514 | Chr.1:904120 - 905120 on Build GRCh38 | Deletion | LOC284600 |
dgv4n111 | Chr.1:869076 - 914637 on Build GRCh38 | Duplication | FAM41C LOC284600 |
nsv1004962 | Chr.1:629241 - 915295 on Build GRCh38 | Gain | MTND2P28 OR4F16 FAM87B LINC00115 LOC284600 MIR6723 LINC01128 LOC100288069 LOC100133331 FAM41C LOC100287934 LOC107984841 MTND1P23 |
nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss | KLHL17 MIR200B GABRD LINC01128 WASH7P C1orf159 DVL1 LOC100288069 FAM41C LOC105378589 PRKCZ CCNL2 DDX11L1 CALML6 AURKAIP1 MIR6859-2 MXRA8 B3GALT6 LOC284600 ANKRD65 LOC100134822 TMEM88B OR4F29 CDK11A CPSF3L MIR6727 MIR429 LOC100129534 NADK MTND1P23 FAAP20 SAMD11 TTLL10-AS1 ATAD3B MIR1302-2 LOC107985728 LOC102725121 GNB1 LOC105378948 LOC100287934 LOC100130417 CDK11B LOC100288175 VWA1 RNF223 FAM87B MIB2 FAM132A TAS1R3 ATAD3A MIR200A MIR6859-1 AGRN SSU72 TNFRSF18 SLC35E2 OR4F16 LOC105378592 MRPL20 MIR6726 ACAP3 LOC105378591 LOC105378947 TNFRSF4 MMP23A MORN1 NOC2L SKI PERM1 LOC107985729 TTLL10 LOC729737 CPTP LINC01342 PLEKHN1 HES4 LOC100506504 CFAP74 LOC100132287 FAM138A TMEM52 TMEM240 FNDC10 SDF4 OR4F5 SCNN1D MTND2P28 ISG15 ATAD3C LINC00115 LOC101928626 MIR6723 SLC35E2B LOC100133331 MMP23B PUSL1 LOC105378949 MIR6808 UBE2J2 LOC148413 LOC107984841 LOC102724312 |
nsv950451 | Chr.1:899421 - 1094520 on Build GRCh38 | Deletion | KLHL17 PERM1 ISG15 RNF223 LOC284600 PLEKHN1 LOC107985728 HES4 LOC105378948 LOC100130417 AGRN C1orf159 LOC100288175 SAMD11 NOC2L |
nsv509035 | Chr.1:891406 - 985724 on Build GRCh38 | Insertion | PLEKHN1 KLHL17 LOC107985728 PERM1 LOC284600 LOC100130417 SAMD11 NOC2L |
dgv1n67 | Chr.1:811028 - 914557 on Build GRCh38 | Gain | FAM41C FAM87B LINC00115 LOC284600 LINC01128 |
nsv1005935 | Chr.1:805477 - 915295 on Build GRCh38 | Gain | FAM41C FAM87B LINC00115 LOC284600 LINC01128 |
esv3584982 | Chr.1:837710 - 917284 on Build GRCh38 | Gain | FAM41C LOC284600 LOC100130417 LINC01128 |
nsv1074399 | Chr.1:904219 - 905420 on Build GRCh38 | Deletion | LOC284600 |
nsv1009537 | Chr.1:841742 - 915295 on Build GRCh38 | Gain | FAM41C LOC284600 LINC01128 |
nsv428334 | Chr.1:874371 - 1220569 on Build GRCh38 | Gain | KLHL17 PERM1 MIR200B RNF223 LOC284600 TTLL10 LINC01342 PLEKHN1 HES4 MIR429 MIR200A AGRN C1orf159 SDF4 SAMD11 TNFRSF18 TTLL10-AS1 ISG15 TNFRSF4 LOC107985728 FAM41C LOC105378948 LOC100130417 LOC100288175 NOC2L |
nsv10161 | Chr.1:776731 - 1777210 on Build GRCh38 | Gain+Loss | KLHL17 MIR200B RNF223 FAM87B MIB2 FAM132A LINC01128 TAS1R3 ATAD3A MIR200A AGRN C1orf159 SSU72 TNFRSF18 SLC35E2 MRPL20 DVL1 MIR6726 LOC100288069 ACAP3 TNFRSF4 MMP23A FAM41C CCNL2 AURKAIP1 NOC2L MXRA8 PERM1 LOC107985729 B3GALT6 LOC284600 TTLL10 ANKRD65 TMEM88B CPTP LINC01342 CDK11A PLEKHN1 CPSF3L MIR6727 HES4 MIR429 TMEM240 FNDC10 SDF4 NADK SAMD11 SCNN1D TTLL10-AS1 ATAD3B ISG15 ATAD3C LINC00115 SLC35E2B MMP23B LOC107985728 PUSL1 MIR6808 LOC105378948 LOC100287934 LOC100130417 UBE2J2 LOC148413 CDK11B LOC100288175 VWA1 LOC102724312 |
dgv5n100 | Chr.1:585989 - 1114424 on Build GRCh38 | Gain | KLHL17 PERM1 RNF223 FAM87B LOC284600 LINC01128 PLEKHN1 HES4 AGRN C1orf159 MTND1P23 SAMD11 MTND2P28 OR4F16 ISG15 LINC00115 LOC101928626 MIR6723 LOC100288069 LOC100133331 LOC105378947 LOC107985728 FAM41C LOC105378948 LOC100287934 LOC100130417 LOC107984841 LOC100288175 NOC2L |
nsv517709 | Chr.1:817186 - 1275912 on Build GRCh38 | Gain+Loss | KLHL17 PERM1 B3GALT6 MIR200B RNF223 FAM87B LOC284600 TTLL10 FAM132A LINC01128 LINC01342 PLEKHN1 HES4 MIR429 MIR200A AGRN C1orf159 SDF4 SAMD11 TNFRSF18 TTLL10-AS1 ISG15 LINC00115 TNFRSF4 LOC107985728 FAM41C LOC105378948 LOC100130417 UBE2J2 LOC100288175 NOC2L |
dgv1n111 | Chr.1:690090 - 939522 on Build GRCh38 | Duplication | OR4F16 FAM87B LINC00115 LOC284600 LINC01128 LOC100288069 LOC100133331 LOC107985728 FAM41C LOC100287934 LOC100130417 LOC107984841 SAMD11 |
dgv3n111 | Chr.1:783283 - 939522 on Build GRCh38 | Duplication | LOC107985728 FAM41C FAM87B LINC00115 LOC284600 LOC100287934 LOC100130417 LINC01128 SAMD11 |
dgv2n67 | Chr.1:877618 - 1426500 on Build GRCh38 | Gain | KLHL17 MXRA8 PERM1 B3GALT6 MIR200B RNF223 LOC284600 TTLL10 ANKRD65 TMEM88B FAM132A CPTP LINC01342 PLEKHN1 CPSF3L MIR6727 TAS1R3 HES4 MIR429 MIR200A AGRN C1orf159 SDF4 SAMD11 TNFRSF18 SCNN1D TTLL10-AS1 ISG15 MRPL20 DVL1 MIR6726 ACAP3 TNFRSF4 LOC107985728 PUSL1 MIR6808 LOC105378948 LOC100130417 UBE2J2 CCNL2 LOC148413 LOC100288175 AURKAIP1 NOC2L |
nsv832980 | Chr.1:848279 - 1007037 on Build GRCh38 | Gain | PLEKHN1 KLHL17 LOC107985728 PERM1 HES4 FAM41C LOC284600 LOC100130417 LINC01128 SAMD11 NOC2L |
esv3584976 | Chr.1:733250 - 914824 on Build GRCh38 | Gain | FAM41C FAM87B LINC00115 LOC284600 LOC100287934 LOC107984841 LINC01128 LOC100288069 |