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Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:968222 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03337860_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
XM_017002478.1 XP_016857967.1
XM_017002479.1 XP_016857968.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain NOC2L LOC107985728 PLEKHN1 AGRN LOC105378948 LOC100288175 SAMD11 PERM1 RNF223 LOC100130417 ISG15 HES4 KLHL17 LOC284600 C1orf159
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIR429 MTND2P28 LOC101928626 NOC2L TNFRSF4 SLC35E2 AGRN LOC105378947 TTLL10 WASH7P LOC107984841 B3GALT6 KLHL17 LOC284600 CFAP74 FAM138A LOC102725121 TTLL10-AS1 LOC100133331 CALML6 LOC148413 OR4F16 LOC100129534 LOC105378948 MIR6723 MXRA8 NADK MIR6859-2 ANKRD65 MIR200A LOC105378592 MORN1 ATAD3C LINC01128 LOC729737 RNF223 LOC100130417 LOC100134822 LOC105378591 HES4 AURKAIP1 CDK11B TMEM52 SCNN1D MIR6727 FNDC10 LOC100506504 TNFRSF18 SSU72 MIB2 OR4F29 MRPL20 MIR6726 CDK11A ISG15 FAM41C LOC107985729 LOC105378589 TAS1R3 PUSL1 MIR1302-2 TMEM88B LOC100132287 CCNL2 MIR6859-1 SDF4 SKI LOC107985728 PLEKHN1 VWA1 CPTP SAMD11 PERM1 GNB1 LINC00115 MIR6808 LOC100287934 MMP23A MMP23B DVL1 FAM87B LINC01342 TMEM240 LOC100288175 DDX11L1 FAAP20 FAM132A UBE2J2 MIR200B C1orf159 LOC100288069 ATAD3A PRKCZ CPSF3L LOC102724312 SLC35E2B LOC105378949 MTND1P23 ACAP3 GABRD ATAD3B OR4F5
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion NOC2L LOC107985728 PLEKHN1 AGRN LOC105378948 LOC100288175 SAMD11 PERM1 RNF223 LOC100130417 ISG15 HES4 KLHL17 LOC284600 C1orf159
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion SAMD11 PERM1 NOC2L LOC100130417 KLHL17 LOC284600 LOC107985728 PLEKHN1
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain MIR429 TTLL10-AS1 NOC2L TNFRSF18 TNFRSF4 LINC01342 AGRN LOC105378948 LOC100288175 TTLL10 ISG15 FAM41C MIR200B C1orf159 MIR200A SDF4 LOC107985728 PLEKHN1 SAMD11 PERM1 RNF223 LOC100130417 HES4 KLHL17 LOC284600
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MIR429 MIR6727 FNDC10 NOC2L TNFRSF18 TNFRSF4 SSU72 SLC35E2 MIB2 AGRN MRPL20 TTLL10 MIR6726 CDK11A ISG15 FAM41C LOC107985729 TAS1R3 PUSL1 TMEM88B CCNL2 SDF4 LOC107985728 PLEKHN1 VWA1 CPTP B3GALT6 SAMD11 PERM1 KLHL17 LINC00115 LOC284600 MIR6808 LOC100287934 MMP23A MMP23B DVL1 TTLL10-AS1 LOC148413 FAM87B LINC01342 TMEM240 LOC105378948 LOC100288175 MXRA8 FAM132A UBE2J2 NADK MIR200B ANKRD65 C1orf159 MIR200A LOC100288069 ATAD3A CPSF3L LOC102724312 ATAD3C SLC35E2B LINC01128 ACAP3 RNF223 LOC100130417 ATAD3B HES4 AURKAIP1 CDK11B SCNN1D
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain MTND2P28 LOC101928626 LOC100133331 NOC2L FAM87B OR4F16 AGRN LOC105378948 MIR6723 LOC100288175 LOC105378947 ISG15 FAM41C C1orf159 LOC100288069 LOC107984841 LINC01128 LOC107985728 MTND1P23 PLEKHN1 SAMD11 PERM1 RNF223 LOC100130417 HES4 KLHL17 LINC00115 LOC284600 LOC100287934
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss MIR429 TTLL10-AS1 NOC2L TNFRSF18 TNFRSF4 FAM87B LINC01342 AGRN LOC105378948 LOC100288175 TTLL10 FAM132A ISG15 UBE2J2 FAM41C MIR200B C1orf159 MIR200A LINC01128 SDF4 LOC107985728 PLEKHN1 B3GALT6 SAMD11 PERM1 RNF223 LOC100130417 HES4 KLHL17 LINC00115 LOC284600
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain NOC2L LINC01342 PLEKHN1 AGRN LOC105378948 LOC100288175 SAMD11 PERM1 RNF223 ISG15 HES4 KLHL17 C1orf159
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion MIR429 MIR200A TTLL10-AS1 NOC2L TNFRSF18 TNFRSF4 LINC01342 SDF4 PLEKHN1 AGRN LOC105378948 LOC100288175 TTLL10 SAMD11 PERM1 RNF223 ISG15 HES4 KLHL17 MIR200B C1orf159
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss SAMD11 PERM1 NOC2L LOC100130417 ISG15 HES4 KLHL17 LOC284600 LOC107985728 PLEKHN1 AGRN
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MIR429 DVL1 MIR6727 TTLL10-AS1 NOC2L TNFRSF18 TNFRSF4 LOC148413 LINC01342 AGRN LOC105378948 LOC100288175 MXRA8 MRPL20 TTLL10 MIR6726 FAM132A ISG15 UBE2J2 TAS1R3 MIR200B ANKRD65 C1orf159 PUSL1 MIR200A TMEM88B CCNL2 CPSF3L SDF4 LOC107985728 PLEKHN1 ACAP3 CPTP B3GALT6 SAMD11 PERM1 RNF223 LOC100130417 HES4 KLHL17 AURKAIP1 LOC284600 MIR6808 SCNN1D
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain SAMD11 PERM1 NOC2L LOC100130417 FAM41C HES4 KLHL17 LINC01128 LOC284600 LOC107985728 PLEKHN1

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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