Assay Details
Target Gene Details
Entrez Gene ID: | 9557 |
Gene Name: | chromodomain helicase DNA binding protein 1 like |
Gene Aliases: |
ALC1, CHDL |
Location: |
Chr.1:147172804-147295766 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CHD1L | XM_017002858.1 | XP_016858347.1 |
Target Gene Details
Entrez Gene ID: | 2330 |
Gene Name: | flavin containing monooxygenase 5 |
Gene Aliases: |
- |
Location: |
Chr.1:147183963-147225798 on Build GRCh38 |
Assay Gene Location: | Within Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FMO5 | NM_001144829.2 | NP_001138301.1 | ||
NM_001144830.2 | NP_001138302.1 | |||
NM_001461.3 | NP_001452.2 | |||
XM_005272946.4 | XP_005273003.1 | |||
XM_005272947.4 | XP_005273004.1 | |||
XM_005272948.4 | XP_005273005.1 | |||
XM_006711244.3 | XP_006711307.1 | |||
XM_006711245.3 | XP_006711308.1 | |||
XM_011509350.2 | XP_011507652.1 | |||
XM_011509351.2 | XP_011507653.1 | |||
XM_017000801.1 | XP_016856290.1 | |||
XM_017000802.1 | XP_016856291.1 | |||
AK022172.1 | BAB13975.1 | |||
AK222728.1 | BAD96448.1 | |||
AK225739.1 | ||||
AK314647.1 | ||||
BC035687.1 | AAH35687.1 | |||
L37080.1 | AAA67849.1 | |||
Z47553.1 | CAA87633.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv327n100 | Chr.1:146028214 - 148860637 on Build GRCh38 | Gain | RNVU1-6 LINC00624 NBPF13P LOC101927468 MIR5087 LOC284561 FMO5 PDIA3P1 RNVU1-1 LOC100996763 GJA5 ACP6 NUDT4P2 LOC101928979 HYDIN2 PDZK1P1 PDE4DIP BCL9 NBPF10 NUDT4P1 NBPF14 LOC105371226 MIR6077 LINC01138 CHD1L CH17-408M7.1 NBPF12 GJA8 NBPF11 NOTCH2NL RNU1-13P GPR89B LOC100505824 LOC105371242 RNVU1-3 RNVU1-7 PPIAL4G PRKAB2 RNVU1-8 LOC100996517 LOC100132057 LOC728989 |
nsv1005055 | Chr.1:145642988 - 148991068 on Build GRCh38 | Loss | RNVU1-6 LINC00624 LOC101927468 MIR5087 GPR89A FMO5 NUDT4P2 LOC101928979 RBM8A NUDT4P1 NUDT17 POLR3GL LINC01138 PDZK1 MIR6736 NBPF12 GJA8 NBPF11 NOTCH2NL GPR89B TXNIP ANKRD34A LOC105371242 ITGA10 RNVU1-3 RNVU1-8 LOC728989 NBPF13P CD160 GNRHR2 LOC284561 PDIA3P1 RNVU1-1 ANKRD35 RNF115 PEX11B LIX1L LOC100996763 GJA5 ACP6 POLR3C HYDIN2 PDZK1P1 PDE4DIP BCL9 NBPF10 HFE2 NBPF14 LOC105371226 MIR6077 CHD1L CH17-408M7.1 RNU1-13P PIAS3 LOC100505824 RNVU1-7 PPIAL4G PRKAB2 LOC100996517 LOC100132057 |
esv2761299 | Chr.1:146068341 - 148926801 on Build GRCh38 | Gain+Loss | LINC00624 NBPF13P LOC101927468 MIR5087 LOC284561 FMO5 PDIA3P1 RNVU1-1 LOC100996763 GJA5 ACP6 NUDT4P2 HYDIN2 PDZK1P1 PDE4DIP BCL9 NBPF10 NUDT4P1 NBPF14 LOC105371226 MIR6077 LINC01138 CHD1L CH17-408M7.1 NBPF12 GJA8 NBPF11 NOTCH2NL RNU1-13P GPR89B LOC100505824 LOC105371242 RNVU1-3 RNVU1-7 PPIAL4G PRKAB2 RNVU1-8 LOC100996517 LOC100132057 LOC728989 |
nsv509457 | Chr.1:145948024 - 149021821 on Build GRCh38 | Insertion | RNVU1-6 LINC00624 NBPF13P LOC101927468 MIR5087 LOC284561 FMO5 PDIA3P1 RNVU1-1 LIX1L LOC100996763 GJA5 ACP6 NUDT4P2 LOC101928979 HYDIN2 PDZK1P1 PDE4DIP BCL9 NBPF10 HFE2 NUDT4P1 NBPF14 LOC105371226 MIR6077 POLR3GL LINC01138 CHD1L CH17-408M7.1 NBPF12 GJA8 NBPF11 NOTCH2NL RNU1-13P GPR89B LOC100505824 TXNIP ANKRD34A LOC105371242 RNVU1-3 RNVU1-7 PPIAL4G PRKAB2 RNVU1-8 LOC100996517 LOC100132057 LOC728989 |
nsv1132304 | Chr.1:146186094 - 148977674 on Build GRCh38 | Duplication | LINC00624 NBPF13P LOC101927468 MIR5087 LOC284561 FMO5 PDIA3P1 RNVU1-1 LOC100996763 GJA5 ACP6 NUDT4P2 HYDIN2 PDZK1P1 PDE4DIP BCL9 NUDT4P1 NBPF14 LOC105371226 MIR6077 LINC01138 CHD1L CH17-408M7.1 NBPF12 GJA8 NBPF11 NOTCH2NL RNU1-13P GPR89B LOC100505824 LOC105371242 RNVU1-3 RNVU1-7 PPIAL4G PRKAB2 RNVU1-8 LOC100996517 LOC100132057 LOC728989 |
nsv1003688 | Chr.1:146036817 - 148934526 on Build GRCh38 | Gain | RNVU1-6 LINC00624 NBPF13P LOC101927468 MIR5087 LOC284561 FMO5 PDIA3P1 RNVU1-1 LOC100996763 GJA5 ACP6 NUDT4P2 LOC101928979 HYDIN2 PDZK1P1 PDE4DIP BCL9 NBPF10 NUDT4P1 NBPF14 LOC105371226 MIR6077 LINC01138 CHD1L CH17-408M7.1 NBPF12 GJA8 NBPF11 NOTCH2NL RNU1-13P GPR89B LOC100505824 LOC105371242 RNVU1-3 RNVU1-7 PPIAL4G PRKAB2 RNVU1-8 LOC100996517 LOC100132057 LOC728989 |
dgv66e199 | Chr.1:146055970 - 149056514 on Build GRCh38 | Deletion | LINC00624 NBPF13P LOC101927468 MIR5087 LOC284561 FMO5 PDIA3P1 RNVU1-1 LOC100996763 GJA5 NBPF9 ACP6 NUDT4P2 LOC101928979 HYDIN2 PDZK1P1 PDE4DIP BCL9 NBPF10 NUDT4P1 NBPF14 LOC105371226 MIR6077 LINC01138 CHD1L CH17-408M7.1 NBPF12 GJA8 NBPF11 NOTCH2NL RNU1-13P GPR89B LOC100505824 LOC105371242 RNVU1-3 RNVU1-7 PPIAL4G PRKAB2 RNVU1-8 LOC100996517 LOC100132057 LOC728989 |
nsv437047 | Chr.1:147171976 - 147369886 on Build GRCh38 | Loss | PDIA3P1 CHD1L PRKAB2 FMO5 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |