Assay Details
Target Gene Details
Entrez Gene ID: | 126208 |
Gene Name: | zinc finger protein 787 |
Gene Aliases: |
TIP20 |
Location: |
Chr.19:56087363-56121373 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ZNF787 | NM_001002836.3 | 3 | 1775 | NP_001002836.2 |
XM_011526445.2 | 3 | 3459 | XP_011524747.1 | |
AF000560.1 | 2 | 1572 | AAB58413.1 | |
AI037960.1 | ||||
BC077728.1 | 3 | 1682 | AAH77728.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833883 | Chr.19:56001235 - 56128720 on Build GRCh38 | Loss | LOC101928886 ZNF787 NLRP5 |
dgv207n21 | Chr.19:56080920 - 56175584 on Build GRCh38 | Loss | ZNF787 ZNF444 |
dgv3680n100 | Chr.19:55871126 - 56097663 on Build GRCh38 | Gain | NLRP13 LOC101928886 ZNF787 NLRP8 NLRP4 NLRP5 |
dgv3681n100 | Chr.19:55906849 - 56338089 on Build GRCh38 | Gain | NLRP13 LOC101928886 ZSCAN5B ZNF787 ZNF444 NLRP8 NLRP5 ZSCAN5A GALP |
dgv206n21 | Chr.19:56026162 - 56195679 on Build GRCh38 | Loss | LOC101928886 ZSCAN5B ZNF787 ZNF444 NLRP5 GALP |
nsv580354 | Chr.19:55994319 - 56212123 on Build GRCh38 | Gain | LOC101928886 ZSCAN5B ZNF787 ZNF444 NLRP5 GALP |
esv2657534 | Chr.19:56086979 - 56089623 on Build GRCh38 | Deletion | ZNF787 |
nsv1057820 | Chr.19:56044576 - 56208893 on Build GRCh38 | Gain | LOC101928886 ZSCAN5B ZNF787 ZNF444 NLRP5 GALP |
More Information
Additional Information:
For this assay, SNP(s) [rs150405930] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |