Assay Details
Target Gene Details
Entrez Gene ID: | 10745 |
Gene Name: | putative homeodomain transcription factor 1 |
Gene Aliases: |
PHTF |
Location: |
Chr.1:113697202-113759888 on Build GRCh38 |
Assay Gene Location: | Within Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PHTF1 | NM_001323041.1 | 9 | 1553 | NP_001309970.1 |
NM_001323042.1 | 9 | 1037 | NP_001309971.1 | |
NM_001323043.1 | 9 | 1438 | NP_001309972.1 | |
NM_001323044.1 | 9 | 1811 | NP_001309973.1 | |
NM_001323045.1 | 10 | 1522 | NP_001309974.1 | |
NM_001323046.1 | 6 | 1049 | NP_001309975.1 | |
NM_001323047.1 | 9 | 1553 | NP_001309976.1 | |
NM_001323048.1 | 9 | 1438 | NP_001309977.1 | |
NM_001323049.1 | 8 | 1727 | NP_001309978.1 | |
NM_001323050.1 | 10 | 1522 | NP_001309979.1 | |
NM_001323051.1 | 9 | 1811 | NP_001309980.1 | |
NM_001323052.1 | 9 | 1438 | NP_001309981.1 | |
NM_001323053.1 | 9 | 1553 | NP_001309982.1 | |
NM_006608.2 | 8 | 1342 | NP_006599.2 | |
NR_136564.1 | 10 | 1637 | ||
NR_136565.1 | 8 | 1278 | ||
NR_136566.1 | 9 | 1553 | ||
NR_136567.1 | 9 | 1438 | ||
NR_136568.1 | 9 | 1362 | ||
AJ011863.1 | 8 | 921 | CAB51572.1 | |
AK126773.1 | 2 | 2041 | ||
AK294749.1 | 7 | 908 | ||
BC000842.1 | 2 | 157 | AAH00842.1 | |
BC002447.2 | 9 | 1486 | AAH02447.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3587245 | Chr.1:113699035 - 113723249 on Build GRCh38 | Loss | PHTF1 |
esv3587240 | Chr.1:113533246 - 114158910 on Build GRCh38 | Loss | PHTF1 PTPN22 AP4B1 DCLRE1B MAGI3 RSBN1 OLFML3 HIPK1-AS1 HIPK1 SYT6 AP4B1-AS1 BCL2L15 |
esv3587239 | Chr.1:113510852 - 113866662 on Build GRCh38 | Loss | PHTF1 PTPN22 MAGI3 RSBN1 AP4B1-AS1 |
nsv831093 | Chr.1:113711545 - 113835613 on Build GRCh38 | Loss | PHTF1 PTPN22 RSBN1 AP4B1-AS1 |
esv23869 | Chr.1:113320330 - 114358495 on Build GRCh38 | Loss | PHTF1 PTPN22 AP4B1 DCLRE1B MAGI3 RSBN1 OLFML3 HIPK1-AS1 HIPK1 SYT6 AP4B1-AS1 BCL2L15 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |