Assay Details
Target Gene Details
Entrez Gene ID: | 5905 |
Gene Name: | Ran GTPase activating protein 1 |
Gene Aliases: |
Fug1, RANGAP, SD |
Location: |
Chr.22:41244777-41302213 on Build GRCh38 |
Assay Gene Location: | Within Exon 23 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RANGAP1 | NM_001278651.1 | 17 | 2813 | NP_001265580.1 |
NM_001317930.1 | 16 | 2267 | NP_001304859.1 | |
NM_002883.3 | 16 | 2352 | NP_002874.1 | |
XM_005261695.1 | 16 | 2480 | XP_005261752.1 | |
XM_005261696.1 | 16 | 2251 | XP_005261753.1 | |
XM_006724289.3 | 16 | 2255 | XP_006724352.1 | |
XM_011530293.1 | 15 | 2345 | XP_011528595.1 | |
XM_011530294.2 | 16 | 3961 | XP_011528596.1 | |
XM_011530295.2 | 16 | 2660 | XP_011528597.1 | |
XM_017028893.1 | 17 | 3591 | XP_016884382.1 | |
XM_017028894.1 | 17 | 3729 | XP_016884383.1 | |
XM_017028895.1 | 16 | 4091 | XP_016884384.1 | |
XM_017028896.1 | 17 | 2479 | XP_016884385.1 | |
XM_017028897.1 | 16 | 3571 | XP_016884386.1 | |
XM_017028898.1 | 18 | 3504 | XP_016884387.1 | |
XM_017028899.1 | 15 | 2217 | XP_016884388.1 | |
AB058738.1 | 15 | 3536 | ||
AK303524.1 | 16 | 2275 | ||
BC004990.1 | 6 | 927 | AAH04990.1 | |
BC014044.2 | 16 | 2267 | AAH14044.1 | |
BC019676.1 | 2 | 468 | AAH19676.1 | |
BC041396.2 | 17 | 2823 | AAH41396.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv589050 | Chr.22:41231539 - 41454496 on Build GRCh38 | Gain | TOB2 ZC3H7B TEF MIR6889 CHADL RANGAP1 LOC100996598 |
nsv817997 | Chr.22:41244293 - 41366866 on Build GRCh38 | Gain | ZC3H7B MIR6889 RANGAP1 |
nsv524585 | Chr.22:40993505 - 41794305 on Build GRCh38 | Loss | LOC105373044 CSDC2 PMM1 MIR1281 L3MBTL2 PHF5A CHADL XRCC6 SNORD140 DESI1 SNU13 ACO2 MEI1 EP300-AS1 LOC100996598 POLR3H EP300 TOB2 ZC3H7B TEF MIR6889 C22orf46 RANGAP1 |
nsv589049 | Chr.22:41168704 - 41276267 on Build GRCh38 | Gain | L3MBTL2 MIR6889 CHADL RANGAP1 EP300-AS1 EP300 |
More Information
Additional Information:
For this assay, SNP(s) [rs73428601] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |