Assay Details
Target Gene Details
Entrez Gene ID: | 102546294 |
Gene Name: | uncharacterized LOC102546294 |
Gene Aliases: |
- |
Location: |
Chr.5:148268307-148383850 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC102546294 | NR_105057.1 | |||
AK054753.1 | ||||
DA523579.1 |
Target Gene Details
Entrez Gene ID: | 153218 |
Gene Name: | serine peptidase inhibitor, Kazal type 13 (putative) |
Gene Aliases: |
HBVDNAPTP1, HESPINTOR, LiESP6, SPINK5L3 |
Location: |
Chr.5:148268860-148286210 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SPINK13 | NM_001040129.2 | 5 | 407 | NP_001035218.1 |
AK001520.1 | 6 | 876 | ||
BC128163.1 | 6 | 559 | ||
BC128164.1 | 5 | 407 | ||
EF108324.1 | 5 | 455 | ||
EF426754.1 | 5 | 455 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3607102 | Chr.5:148026584 - 148359140 on Build GRCh38 | Loss | SPINK13 SPINK5 LOC105378220 LOC102546294 SPINK6 SPINK9 SPINK14 SPINK7 |
esv3607107 | Chr.5:148224310 - 148363295 on Build GRCh38 | Gain | SPINK13 LOC105378220 LOC102546294 SPINK9 SPINK7 |
nsv599945 | Chr.5:148269618 - 148340924 on Build GRCh38 | Loss | SPINK13 LOC102546294 SPINK9 SPINK7 |
dgv10111n54 | Chr.5:148268947 - 148310137 on Build GRCh38 | Gain | SPINK13 LOC102546294 |
More Information
Additional Information:
For this assay, SNP(s) [rs77042463,rs77875146] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |