Assay Details
Target Gene Details
Entrez Gene ID: | 401494 |
Gene Name: | 3-hydroxyacyl-CoA dehydratase 4 |
Gene Aliases: |
PTPLAD2 |
Location: |
Chr.9:21003621-21031712 on Build GRCh38 |
Assay Gene Location: | Within Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HACD4 | NM_001010915.4 | 7 | 1058 | NP_001010915.2 |
NM_001321883.1 | 7 | 995 | NP_001308812.1 | |
NM_001321903.1 | 9 | 1211 | NP_001308832.1 | |
XM_011517876.2 | 8 | 1086 | XP_011516178.1 | |
XM_017014713.1 | 9 | 1401 | XP_016870202.1 | |
XM_017014714.1 | 8 | 1148 | XP_016870203.1 | |
BC114215.1 | 7 | 992 | AAI14216.1 | |
BX538052.1 | 6 | 857 | CAD97990.1 | |
BX648779.1 | 7 | 1020 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1017312 | Chr.9:20892953 - 21122463 on Build GRCh38 | Gain | FOCAD HACD4 IFNB1 |
esv2764150 | Chr.9:20659506 - 22349184 on Build GRCh38 | Gain+Loss | IFNA16 IFNA6 IFNW1 IFNB1 FOCAD IFNA22P IFNA4 FOCAD-AS1 IFNA10 IFNA8 IFNA21 IFNE MIR31HG MIR31 KLHL9 CDKN2B IFNA5 IFNA2 CDKN2B-AS1 ERVFRD-3 MTAP IFNA17 CDKN2A IFNA1 CDKN2A-AS1 IFNA14 IFNA13 MIR491 IFNA7 HACD4 |
nsv1161847 | Chr.9:21006309 - 21091241 on Build GRCh38 | Deletion | HACD4 IFNB1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |