Assay Details
Target Gene Details
Entrez Gene ID: | 51179 |
Gene Name: | hydroxyacid oxidase 2 |
Gene Aliases: |
GIG16, HAOX2 |
Location: |
Chr.1:119361913-119394130 on Build GRCh38 |
Assay Gene Location: | Within Exon 11 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HAO2 | NM_001005783.2 | 9 | 1595 | NP_001005783.2 |
NM_016527.3 | 8 | 1375 | NP_057611.1 | |
XM_011541558.1 | 6 | 1103 | XP_011539860.1 | |
XM_011541559.1 | 5 | 968 | XP_011539861.1 | |
XM_011541560.1 | 6 | 1038 | XP_011539862.1 | |
XM_017001421.1 | 8 | 1861 | XP_016856910.1 | |
AA919149.1 | 1 | 114 | ||
AF203975.1 | 9 | 1502 | AAF14000.1 | |
AF231917.1 | 8 | 1313 | AAF40200.1 | |
AK298289.1 | 9 | 1595 | ||
BC020863.1 | 9 | 1562 | AAH20863.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2763647 | Chr.1:119386819 - 119612175 on Build GRCh38 | Gain+Loss | LINC00622 HSD3B2 HSD3BP4 HSD3B1 HAO2 |
nsv2599 | Chr.1:119392400 - 119425125 on Build GRCh38 | Deletion | HSD3B2 HAO2 |
esv34089 | Chr.1:119209489 - 119530338 on Build GRCh38 | Loss | LOC101929147 HAO2-IT1 HSD3B2 HSD3B1 HAO2 |
nsv1004662 | Chr.1:119304824 - 119612175 on Build GRCh38 | Gain | LINC00622 HAO2-IT1 HSD3B2 HSD3BP4 HSD3B1 HAO2 |
nsv524681 | Chr.1:118890895 - 121570001 on Build GRCh38 | Gain | RNVU1-4 LINC00622 SRGAP2C NOTCH2 REG4 FCGR1B LOC100996720 LOC105369199 HSD3BP4 LINC00623 HMGCS2 PHGDH LOC100996721 HAO2-IT1 LOC105378933 EMBP1 SEC22B HSD3B1 NBPF26 LOC100996318 WARS2 LOC101929796 LOC101929147 ZNF697 ADAM30 HSD3B2 WARS2-IT1 RNVU1-19 HIST2H2BA PPIAL4A HAO2 LOC101929798 NBPF7 LOC100996724 NBPF8 FAM72B PFN1P2 SRGAP2-AS1 TBX15 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |