Assay Details
Target Gene Details
Entrez Gene ID: | 92292 |
Gene Name: | glycine-N-acyltransferase like 1 |
Gene Aliases: |
GATF-C, GNAT |
Location: |
Chr.11:58927629-58957074 on Build GRCh38 |
Assay Gene Location: | Within Exon 11 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GLYATL1 | NM_001220494.2 | 8 | 1810 | NP_001207423.1 |
NM_001220496.2 | 7 | 1638 | NP_001207425.1 | |
NM_080661.4 | 7 | 1541 | NP_542392.2 | |
XM_011545354.2 | 7 | 1657 | XP_011543656.1 | |
XM_011545355.2 | 7 | 1643 | XP_011543657.1 | |
XM_011545356.2 | 8 | 1702 | XP_011543658.1 | |
XM_011545357.2 | 8 | 1688 | XP_011543659.1 | |
XM_011545358.2 | 8 | 2226 | XP_011543660.1 | |
XM_011545359.2 | 7 | 2182 | XP_011543661.1 | |
AK091965.1 | 7 | 1541 | BAC03779.1 | |
AK300479.1 | 8 | 1706 |
Target Gene Details
Entrez Gene ID: | 283194 |
Gene Name: | uncharacterized LOC283194 |
Gene Aliases: |
- |
Location: |
Chr.11:58933643-59058452 on Build GRCh38 |
Assay Gene Location: | Within Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC283194 | NR_033853.2 | |||
AK091446.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv14n68 | Chr.11:58932624 - 59111366 on Build GRCh38 | Gain | LOC283194 GLYATL1 GLYATL1P1 FAM111B |
dgv139e201 | Chr.11:58845738 - 59113363 on Build GRCh38 | Deletion | LOC283194 LOC100287413 GLYATL1P2 GLYATL1 GLYATL1P1 GLYATL2 FAM111B |
nsv1050013 | Chr.11:58627125 - 59453617 on Build GRCh38 | Gain | LOC283194 OR5A2 OR5AN1 FAM111A GLYAT LOC101927204 GLYATL1 GLYATL1P1 DTX4 MPEG1 GLYATL2 FAM111B LOC100287413 GLYATL1P2 LOC105369314 OR5A1 |
nsv482929 | Chr.11:58932626 - 59094208 on Build GRCh38 | Gain | LOC283194 GLYATL1 GLYATL1P1 |
esv2759830 | Chr.11:58932619 - 59241200 on Build GRCh38 | Gain | LOC283194 FAM111A LOC101927204 GLYATL1 GLYATL1P1 DTX4 MPEG1 FAM111B |
More Information
Additional Information:
For this assay, SNP(s) [rs75540280] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |