Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | 1 | 361 | NP_060831.2 |
XM_011534751.2 | 1 | 131 | XP_011533053.1 | |
AF375789.1 | 1 | 323 | AAK54809.1 | |
AK002072.1 | BAA92069.1 | |||
AK310545.1 | ||||
AL136587.1 | 1 | 51 | CAB66522.1 | |
BC023550.2 | 1 | 305 | AAH23550.1 | |
BC068519.1 | AAH68519.1 | |||
BC080537.1 | 1 | 330 | AAH80537.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | DEFA4 MIR8055 ANGPT2 MIR4659B DEFA8P DEFA6 MCPH1 AGPAT5 MIR4659A DEFB1 GS1-24F4.2 XKR5 MCPH1-AS1 |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | DEFB1 MIR8055 ANGPT2 MIR4659B GS1-24F4.2 XKR5 MCPH1 AGPAT5 MCPH1-AS1 MIR4659A |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | MIR8055 MIR4659B XKR5 MCPH1 AGPAT5 MCPH1-AS1 MIR4659A |
nsv6059 | Chr.8:6693878 - 6726740 on Build GRCh38 | Insertion | AGPAT5 MCPH1-AS1 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | DEFB1 MIR8055 ANGPT2 MIR4659B GS1-24F4.2 XKR5 MCPH1 AGPAT5 MCPH1-AS1 MIR4659A |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | DEFB1 MIR4659B GS1-24F4.2 XKR5 AGPAT5 MCPH1-AS1 MIR4659A |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | MIR4659B XKR5 AGPAT5 MCPH1-AS1 MIR4659A |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |