Assay Details
Target Gene Details
Entrez Gene ID: | 100996485 |
Gene Name: | chromosome 5 open reading frame 66 |
Gene Aliases: |
- |
Location: |
Chr.5:135033280-135344680 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C5orf66 | NM_001277348.1 | NP_001264277.1 | ||
AK026965.1 | BAB15606.1 |
Target Gene Details
Entrez Gene ID: | 9555 |
Gene Name: | H2A histone family member Y |
Gene Aliases: |
H2A.y, H2A/y, H2AF12M, MACROH2A1.1, mH2A1, macroH2A1.2 |
Location: |
Chr.5:135334381-135399887 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
H2AFY | NM_001040158.1 | 9 | 1314 | NP_001035248.1 |
NM_004893.2 | 9 | 1277 | NP_004884.1 | |
NM_138609.2 | 9 | 1308 | NP_613075.1 | |
NM_138610.2 | 9 | 1317 | NP_613258.2 | |
XM_005272132.1 | 9 | 1683 | XP_005272189.1 | |
XM_011543729.2 | 9 | 1234 | XP_011542031.1 | |
XM_011543730.2 | 9 | 1234 | XP_011542032.1 | |
XM_011543731.1 | 8 | 1520 | XP_011542033.1 | |
XM_011543732.1 | 8 | 1517 | XP_011542034.1 | |
XM_017010067.1 | 8 | 1504 | XP_016865556.1 | |
AB209490.1 | 4 | 10375 | BAD92727.1 | |
AF041483.1 | 9 | 1214 | AAC33433.1 | |
AF044286.1 | AAC33434.1 | |||
AF054174.1 | 9 | 1277 | AAC39908.1 | |
AK023409.1 | 9 | 1308 | BAB14565.1 | |
AK092944.1 | 1 | 2315 | ||
AK123153.1 | 4 | 1135 | ||
AK296014.1 | 5 | 792 | ||
AY134746.1 | 8 | 1090 | AAN08620.1 | |
BC013331.1 | 9 | 1243 | AAH13331.1 | |
BC095406.1 | 9 | 1277 | AAH95406.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv5015 | Chr.5:135289703 - 135349301 on Build GRCh38 | Insertion | C5orf66 H2AFY |
nsv599745 | Chr.5:135329392 - 135393177 on Build GRCh38 | Loss | C5orf66 H2AFY |
nsv830496 | Chr.5:135205341 - 135340397 on Build GRCh38 | Gain | C5orf66 C5orf66-AS2 H2AFY |
More Information
Additional Information:
For this assay, SNP(s) [rs73789312] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |