Assay Details
Target Gene Details
Entrez Gene ID: | 259232 |
Gene Name: | sodium leak channel, non-selective |
Gene Aliases: |
CLIFAHDD, CanIon, IHPRF, IHPRF1, INNFD, VGCNL1, bA430M15.1 |
Location: |
Chr.13:101053774-101417206 on Build GRCh38 |
Assay Gene Location: | Within Exon 47 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
NALCN | NM_052867.2 | 44 | 6776 | NP_443099.1 |
XM_011521067.2 | 44 | 6716 | XP_011519369.1 | |
AF339780.1 | 1 | 648 | ||
AK002089.1 | 3 | 1843 | ||
AK055506.1 | 11 | 2833 | ||
AK126621.1 | 25 | 4240 | ||
AK126718.1 | 17 | 3377 | ||
AK172752.1 | 7 | 2307 | BAD18738.1 |
Target Gene Details
Entrez Gene ID: | 100885778 |
Gene Name: | NALCN antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.13:100708325-101059286 on Build GRCh38 |
Assay Gene Location: | Within Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
NALCN-AS1 | NR_047687.1 | |||
AK025806.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1149 | Chr.13:101042454 - 101087249 on Build GRCh38 | Deletion | NALCN NALCN-AS1 |
nsv832699 | Chr.13:100951779 - 101142880 on Build GRCh38 | Gain | NALCN NALCN-AS1 |
More Information
Additional Information:
For this assay, SNP(s) [rs145134837] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |