Assay Details
Target Gene Details
Entrez Gene ID: | 79682 |
Gene Name: | centromere protein U |
Gene Aliases: |
CENP50, CENPU50, KLIP1, MLF1IP, PBIP1 |
Location: |
Chr.4:184694065-184734132 on Build GRCh38 |
Assay Gene Location: | Within Exon 14 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CENPU | NM_024629.3 | 13 | 1625 | NP_078905.2 |
NR_104593.1 | 12 | 1563 | ||
XM_005263218.4 | 13 | 1660 | XP_005263275.2 | |
AF469667.1 | AAQ05290.1 | |||
AF516710.1 | 14 | 2042 | AAQ08228.1 | |
AK027121.1 | BAB15665.1 | |||
BC031520.1 | AAH31520.1 | |||
BC107744.1 | AAI07745.1 | |||
BC131556.1 | 13 | 1625 | ||
BC141854.1 | ||||
BG031878.1 | 2 | 467 | ||
BX355581.2 | 1 | 872 |
Target Gene Details
Entrez Gene ID: | 201973 |
Gene Name: | primase and DNA directed polymerase |
Gene Aliases: |
CCDC111, MYP22 |
Location: |
Chr.4:184649613-184694959 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 15 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv830168 | Chr.4:184626297 - 184801578 on Build GRCh38 | Loss | CASP3 PRIMPOL SLED1 ACSL1 CENPU |
nsv1026074 | Chr.4:184384963 - 184780663 on Build GRCh38 | Gain | LVCAT8 IRF2 CASP3 PRIMPOL ACSL1 CENPU |
More Information
Additional Information:
For this assay, SNP(s) [rs150279210] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Non-exonic DGV Variation |