Assay Details
Target Gene Details
Entrez Gene ID: | 83986 |
Gene Name: | family with sequence similarity 234 member A |
Gene Aliases: |
C16orf9, ITFG3, gs19 |
Location: |
Chr.16:234546-269943 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 10 - Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAM234A | NM_001284497.1 | NP_001271426.1 | ||
NM_032039.3 | NP_114428.1 | |||
NR_104317.1 | ||||
XM_005255622.1 | XP_005255679.1 | |||
XM_005255623.2 | XP_005255680.1 | |||
XM_006720957.1 | XP_006721020.1 | |||
XM_011522691.1 | XP_011520993.1 | |||
XM_011522692.1 | XP_011520994.1 | |||
XM_017023760.1 | XP_016879249.1 | |||
XM_017023761.1 | XP_016879250.1 | |||
XM_017023762.1 | XP_016879251.1 | |||
XM_017023763.1 | XP_016879252.1 | |||
XM_017023764.1 | XP_016879253.1 | |||
XM_017023765.1 | XP_016879254.1 | |||
AK057165.1 | BAB71374.1 | |||
AK294581.1 | ||||
AK310766.1 | ||||
AL136542.1 | CAB66477.1 | |||
BC010521.1 | AAH10521.1 | |||
BC013047.1 | AAH13047.1 | |||
BC032112.2 | AAH32112.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | MEIOB LMF1-AS1 NPRL3 LMF1 RNF151 RHBDF1 SNORA64 HAGHL MIR940 PRR35 TRAF7 SPSB3 PTX4 HBZ HBM KCTD5 EME2 C16orf91 MIR3180-5 MIR662 RPL3L RGS11 GFER TBL3 METTL26 SNRNP25 UNKL LOC100287175 HN1L NOXO1 CLCN7 DDX11L10 DECR2 NME3 CCDC154 CCNF RPS2 LOC101929280 LOC729652 WASIR2 TSC2 RPUSD1 LOC105371047 MIR3677 TMEM204 NDUFB10 LOC105371184 MIR5587 PDPK1 PGP LOC107984876 ZNF598 GNPTG MPG DNASE1L2 MCRIP2 LOC105371045 ATP6V0C MIR6859-4 MSRB1 MIR3178 LINC00254 ABCA17P MIR3177 CCDC78 C16orf59 TPSD1 NME4 LOC106660606 LOC105371046 LOC100134368 MIR6511B1 SNORD60 CHTF18 MIR6767 NTN3 PKD1 TBC1D24 ABCA3 RPL23AP5 GNG13 NUBP2 TELO2 MRPS34 TPSG1 NARFL TPSB2 SOX8 TPSAB1 FLJ42627 LOC652276 METRN E4F1 SLC9A3R2 HBA1 WDR90 RNPS1 PIGQ PRSS29P IFT140 HBQ1 AXIN1 ARHGDIG RHOT2 MIR6768 FAM173A PRR25 PDIA2 BAIAP3 CEMP1 LUC7L FAM234A HS3ST6 RHBDL1 SSTR5 MIR4717 WDR24 CRAMP1 SNHG9 BRICD5 AMDHD2 LOC107987233 SNHG19 NHLRC4 CACNA1H LINC00235 MSLN MIR3176 JMJD8 MRPL28 POLR3K IGFALS MIR4516 CAPN15 C1QTNF8 HBA2 HAGH MAPK8IP3 ECI1 FBXL16 LOC105371049 FAHD1 TSR3 CASKIN1 MIR1225 RAB11FIP3 SYNGR3 STUB1 LOC105371038 NTHL1 NPW RAB26 UBE2I WFIKKN1 SSTR5-AS1 ERVK13-1 SNORA10 RAB40C PRSS27 TMEM8A SNORA78 MLST8 |
esv3570031 | Chr.16:243389 - 278107 on Build GRCh38 | Gain | FAM234A RGS11 |
dgv32n68 | Chr.16:245507 - 476226 on Build GRCh38 | Loss | DECR2 RAB11FIP3 LOC100134368 FAM234A AXIN1 ARHGDIG RPL23AP5 PDIA2 MRPL28 TMEM8A RGS11 NME4 |
More Information
Additional Information:
For this assay, SNP(s) [rs73486203] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Non-exonic DGV Variation |