Assay Details
Target Gene Details
Entrez Gene ID: | 83986 |
Gene Name: | family with sequence similarity 234 member A |
Gene Aliases: |
C16orf9, ITFG3, gs19 |
Location: |
Chr.16:234546-269943 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 10 - Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAM234A | NM_001284497.1 | NP_001271426.1 | ||
NM_032039.3 | NP_114428.1 | |||
NR_104317.1 | ||||
XM_005255622.1 | XP_005255679.1 | |||
XM_005255623.2 | XP_005255680.1 | |||
XM_006720957.1 | XP_006721020.1 | |||
XM_011522691.1 | XP_011520993.1 | |||
XM_011522692.1 | XP_011520994.1 | |||
XM_017023760.1 | XP_016879249.1 | |||
XM_017023761.1 | XP_016879250.1 | |||
XM_017023762.1 | XP_016879251.1 | |||
XM_017023763.1 | XP_016879252.1 | |||
XM_017023764.1 | XP_016879253.1 | |||
XM_017023765.1 | XP_016879254.1 | |||
AK057165.1 | BAB71374.1 | |||
AK294581.1 | ||||
AK310766.1 | ||||
AL136542.1 | CAB66477.1 | |||
BC010521.1 | AAH10521.1 | |||
BC013047.1 | AAH13047.1 | |||
BC032112.2 | AAH32112.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | AMDHD2 HBZ PDPK1 PTX4 ABCA3 GFER MIR3177 LOC105371184 MIR3677 MSLN LINC00254 NME4 RNPS1 GNG13 RAB40C DECR2 EME2 LOC729652 JMJD8 CCDC78 MIR4516 C16orf59 MIR5587 LOC105371049 PRR35 BRICD5 WDR90 NPW FLJ42627 SLC9A3R2 CHTF18 MPG MEIOB PIGQ CAPN15 NHLRC4 NPRL3 LOC652276 SNORA64 NUBP2 NARFL MIR1225 TBC1D24 MIR6767 LOC101929280 HAGHL MAPK8IP3 TPSAB1 LINC00235 CLCN7 SOX8 FBXL16 METTL26 BAIAP3 DNASE1L2 UBE2I SNORA78 MCRIP2 HS3ST6 PRSS29P MRPL28 CCDC154 PRSS27 NME3 CASKIN1 PKD1 CRAMP1 LOC100287175 MIR6768 SSTR5-AS1 NDUFB10 MIR662 IFT140 KCTD5 CACNA1H MIR6511B1 STUB1 RPL23AP5 C1QTNF8 RPL3L CCNF NTN3 LOC105371047 RHOT2 HBQ1 ARHGDIG PGP POLR3K HBA1 WASIR2 MIR4717 PRR25 SNORD60 HN1L LMF1-AS1 DDX11L10 TSC2 SNRNP25 TPSB2 SNHG9 TPSD1 ABCA17P ATP6V0C LMF1 TMEM8A MIR3176 RNF151 TRAF7 E4F1 TPSG1 TELO2 RAB11FIP3 MIR3178 LUC7L GNPTG WDR24 LOC100134368 RAB26 MIR6859-4 LOC105371038 RPUSD1 FAM234A TSR3 FAHD1 TMEM204 MIR940 CEMP1 MIR3180-5 HBA2 SNORA10 LOC106660606 SNHG19 IGFALS RPS2 AXIN1 HBM ZNF598 SYNGR3 SSTR5 RHBDF1 SPSB3 FAM173A LOC107987233 ECI1 RGS11 NTHL1 LOC105371046 ERVK13-1 LOC105371045 MLST8 HAGH METRN UNKL NOXO1 WFIKKN1 C16orf91 LOC107984876 TBL3 PDIA2 MRPS34 RHBDL1 MSRB1 |
esv3570031 | Chr.16:243389 - 278107 on Build GRCh38 | Gain | RGS11 FAM234A |
dgv32n68 | Chr.16:245507 - 476226 on Build GRCh38 | Loss | LOC100134368 TMEM8A RGS11 NME4 RAB11FIP3 AXIN1 FAM234A PDIA2 DECR2 ARHGDIG RPL23AP5 MRPL28 |
More Information
Additional Information:
For this assay, SNP(s) [rs73486203] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Non-exonic DGV Variation |