Assay Details
Target Gene Details
Entrez Gene ID: | 221477 |
Gene Name: | chromosome 6 open reading frame 89 |
Gene Aliases: |
BRAP |
Location: |
Chr.6:36834886-36928964 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C6orf89 | XM_017010434.1 | XP_016865923.1 |
Target Gene Details
Entrez Gene ID: | 51645 |
Gene Name: | peptidylprolyl isomerase like 1 |
Gene Aliases: |
CGI-124, CYPL1, PPIase, hCyPX |
Location: |
Chr.6:36854829-36875024 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PPIL1 | NM_016059.4 | NP_057143.1 | ||
AK026636.1 | ||||
AY359032.1 | AAQ89391.1 | |||
BC003048.1 | AAH03048.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv5262 | Chr.6:36831553 - 36858434 on Build GRCh38 | Deletion | C6orf89 CPNE5 PPIL1 |
nsv1015689 | Chr.6:36550916 - 39052434 on Build GRCh38 | Gain | C6orf89 CCDC167 LOC107986531 LOC100505530 MIR4462 MTCH1 PIM1 CPNE5 PI16 TMEM217 GLP1R TBC1D22B MDGA1 CDKN1A RAB44 SRSF3 GLO1 PANDAR BTBD9 FGD2 MIR3925 ZFAND3 RNF8 CMTR1 PPIL1 LOC100131047 DNAH8 |
More Information
Additional Information:
For this assay, SNP(s) [rs79070450] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |