Assay Details
Target Gene Details
Entrez Gene ID: | 63935 |
Gene Name: | PDX1 C-terminal inhibiting factor 1 |
Gene Aliases: |
C20orf67, PPP1R121 |
Location: |
Chr.20:45934674-45948023 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCIF1 | NM_022104.3 | 7 | 873 | NP_071387.1 |
XM_011528980.2 | 7 | 924 | XP_011527282.1 | |
XM_011528981.2 | 7 | 835 | XP_011527283.1 | |
XM_017028013.1 | 7 | 1034 | XP_016883502.1 | |
XM_017028014.1 | 7 | 837 | XP_016883503.1 | |
AB050014.1 | 7 | 853 | BAC45238.1 | |
AK299435.1 | 7 | 858 | ||
BC010005.2 | 7 | 845 | AAH10005.1 | |
BC013365.2 | 7 | 844 | AAH13365.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833991 | Chr.20:45885631 - 46068708 on Build GRCh38 | Loss | PCIF1 CTSA MMP9 ZNF335 NEURL2 SPATA25 LOC107985388 NCOA5 SLC12A5 PLTP |
nsv517296 | Chr.20:45854586 - 45965936 on Build GRCh38 | Loss | PCIF1 CTSA ZSWIM3 ZNF335 NEURL2 SPATA25 LOC107985388 ZSWIM1 PLTP ACOT8 |
nsv833990 | Chr.20:45771510 - 45946844 on Build GRCh38 | Loss | SNX21 CTSA ZSWIM3 TNNC2 NEURL2 SPATA25 PCIF1 DNTTIP1 WFDC3 LOC107985388 UBE2C ZSWIM1 PLTP ACOT8 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |