Assay Details
Target Gene Details
Entrez Gene ID: | 80333 |
Gene Name: | potassium voltage-gated channel interacting protein 4 |
Gene Aliases: |
CALP, KCHIP4 |
Location: |
Chr.4:20728520-21948801 on Build GRCh38 |
Assay Gene Location: | Within Exon 14 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
KCNIP4 | NM_001035003.1 | 8 | 1849 | NP_001030175.1 |
NM_001035004.1 | 8 | 1770 | NP_001030176.1 | |
NM_025221.5 | 9 | 1786 | NP_079497.2 | |
NM_147181.3 | 8 | 1684 | NP_671710.1 | |
NM_147182.3 | 9 | 1796 | NP_671711.1 | |
NM_147183.3 | 8 | 1603 | NP_671712.1 | |
XM_005248190.4 | 8 | 1699 | XP_005248247.1 | |
XM_011513882.2 | 8 | 3706 | XP_011512184.1 | |
XM_011513883.2 | 7 | 3575 | XP_011512185.1 | |
XM_011513884.2 | 7 | 3599 | XP_011512186.1 | |
XM_011513885.2 | 7 | 8895 | XP_011512187.1 | |
XM_011513886.2 | 7 | 3610 | XP_011512188.1 | |
XM_011513887.2 | 7 | 4375 | XP_011512189.1 | |
XM_011513889.2 | 7 | 3565 | XP_011512191.1 | |
XM_017008653.1 | 8 | 1872 | XP_016864142.1 | |
AK289661.1 | ||||
BX648990.1 | 8 | 1850 |
Target Gene Details
Entrez Gene ID: | 133015 |
Gene Name: | PARK2 coregulated like |
Gene Aliases: |
C4orf28 |
Location: |
Chr.4:20696282-20757766 on Build GRCh38 |
Assay Gene Location: | Within Exon 15 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PACRGL | NR_133933.1 | |||
XM_011513786.2 | 11 | 3129 | XP_011512088.1 | |
XM_011513805.2 | 8 | 2670 | XP_011512107.1 | |
XM_017007747.1 | 10 | 2884 | XP_016863236.1 | |
XM_017007748.1 | 10 | 2835 | XP_016863237.1 | |
XM_017007749.1 | 9 | 2750 | XP_016863238.1 | |
XM_017007751.1 | 9 | 2952 | XP_016863240.1 | |
XM_017007752.1 | 8 | 2799 | XP_016863241.1 | |
XM_017007753.1 | 8 | 2669 | XP_016863242.1 | |
XM_017007754.1 | 6 | 2726 | XP_016863243.1 | |
XM_017007755.1 | 6 | 2543 | XP_016863244.1 | |
XM_017007756.1 | 6 | 2536 | XP_016863245.1 | |
XM_017007757.1 | 6 | 2472 | XP_016863246.1 | |
XM_017007758.1 | 5 | 2421 | XP_016863247.1 | |
XM_017007759.1 | 5 | 2369 | XP_016863248.1 | |
AK098692.1 | BAC05381.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv829876 | Chr.4:20637113 - 20833998 on Build GRCh38 | Gain | KCNIP4 PACRGL |
More Information
Additional Information:
For this assay, SNP(s) [rs188184237] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |