Assay Details
Target Gene Details
Entrez Gene ID: | 838 |
Gene Name: | caspase 5 |
Gene Aliases: |
ICE(rel)III, ICEREL-III, ICH-3 |
Location: |
Chr.11:104994240-105023902 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CASP5 | NM_001136109.1 | 2 | 235 | NP_001129581.1 |
NM_001136110.1 | NP_001129582.1 | |||
NM_001136112.1 | 3 | 448 | NP_001129584.1 | |
NM_004347.3 | 3 | 409 | NP_004338.3 | |
NR_024239.1 | 2 | 235 | ||
NR_036562.1 | ||||
XM_011543021.2 | 3 | 1143 | XP_011541323.1 | |
AK296660.1 | 2 | 235 | ||
BC074994.2 | 2 | 354 | AAH74994.1 | |
BC113406.1 | 2 | 354 | ||
DQ228672.1 | 2 | 377 | ||
DQ228673.1 | 1 | 203 | ||
DQ228676.1 | 1 | 203 | ||
DQ228677.1 | 2 | 416 | ||
DR005081.1 | 2 | 463 | ||
U28015.1 | 2 | 363 | AAA75172.1 | |
X94993.1 | 2 | 270 | CAA64450.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv556219 | Chr.11:105004534 - 105047790 on Build GRCh38 | Loss | CASP5 CASP1 CARD16 |
esv2750978 | Chr.11:104094062 - 105475331 on Build GRCh38 | Gain | MIR7641-1 CASP1P2 LOC102723895 CASP5 CARD17 CASP1 CASP12 PDGFD CARD18 CARD16 LOC643733 CASP4 |
nsv1052674 | Chr.11:104111970 - 107043401 on Build GRCh38 | Loss | MIR7641-1 GUCY1A2 LOC102723895 CASP5 KBTBD3 CARD17 CASP12 LOC101928535 CARD18 LOC643733 CASP1P2 MSANTD4 AASDHPPT CASP1 PDGFD CARD16 GRIA4 LOC105369473 CASP4 |
nsv1046098 | Chr.11:104336482 - 105132934 on Build GRCh38 | Loss | CASP1P2 LOC102723895 CASP5 CARD17 CASP1 CASP12 CARD16 LOC643733 CASP4 |
nsv1041081 | Chr.11:104927048 - 105041731 on Build GRCh38 | Loss | CASP5 CASP1 CARD16 CASP4 |
nsv468862 | Chr.11:104903287 - 105372644 on Build GRCh38 | Gain | CASP1P2 CASP5 CARD17 CASP1 CARD18 CARD16 LOC643733 CASP4 |
nsv1038877 | Chr.11:104166130 - 105422422 on Build GRCh38 | Gain | MIR7641-1 CASP1P2 LOC102723895 CASP5 CARD17 CASP1 CASP12 CARD18 CARD16 LOC643733 CASP4 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |