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Gene Symbol
SGCZ
Assay Reference Genome
Location

Chr.8:14102426 on build GRCh38
Cytoband
8p22
Assay ID Hs02621369_cn
Size
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 137868

Gene Name:

 sarcoglycan zeta

Gene Aliases:

 ZSG1

Location:

 Chr.8:14084835-15238283 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SGCZ NM_001322879.1 6 1252 NP_001309808.1
NM_001322880.1 6 1231 NP_001309809.1
NM_001322881.1 6 1137 NP_001309810.1
NM_139167.3 7 1354 NP_631906.2
AY028700.1 6 655 AAK21962.1
AY502063.1 7 694 AAR89453.1
BC069459.1 6 655 AAH69459.1
BC125037.1 5 553

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv610460 Chr.8:14037682 - 14115956 on Build GRCh38 Gain SGCZ
esv3616349 Chr.8:13970635 - 14105055 on Build GRCh38 Gain SGCZ
nsv517019 Chr.8:13511552 - 14801106 on Build GRCh38 Gain+Loss DLC1 SGCZ LOC102725080 C8orf48
dgv7101n100 Chr.8:14038545 - 14109037 on Build GRCh38 Gain SGCZ
nsv470190 Chr.8:14037681 - 14115956 on Build GRCh38 Gain SGCZ
esv2761413 Chr.8:14095467 - 14114573 on Build GRCh38 Loss SGCZ
nsv610452 Chr.8:13799452 - 14103624 on Build GRCh38 Loss SGCZ
esv3616352 Chr.8:14044616 - 14186950 on Build GRCh38 Loss SGCZ
nsv610411 Chr.8:13093516 - 14267300 on Build GRCh38 Loss DLC1 SGCZ LOC102725080 LOC101930149 C8orf48
nsv1022834 Chr.8:13067043 - 14121780 on Build GRCh38 Gain DLC1 SGCZ LOC102725080 LOC101930149 C8orf48
nsv1031710 Chr.8:13987713 - 14121675 on Build GRCh38 Loss SGCZ

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More Information


Additional Information:

For this assay, SNP(s) [rs74802077] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

cytoskeletal protein

Gene Ontology Categories:

Function(s)


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