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Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:971169 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02602794_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 7 740 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 7 1417 XP_006711007.2
XM_011542248.2 6 1537 XP_011540550.2
XM_017002474.1 6 1537 XP_016857963.1
XM_017002475.1 6 1537 XP_016857964.1
XM_017002476.1 6 1537 XP_016857965.1
XM_017002477.1 6 1537 XP_016857966.1
XM_017002478.1 6 1537 XP_016857967.1
XM_017002479.1 6 1537 XP_016857968.1
AL136730.1 CAB66664.1
BC101386.2 7 735 AAI01387.1
BC101387.2 6 855 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain KLHL17 LOC105378948 LOC100288175 ISG15 LOC107985728 AGRN C1orf159 NOC2L SAMD11 RNF223 PLEKHN1 LOC100130417 PERM1 HES4 LOC284600
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss PUSL1 ISG15 LOC107985728 LOC107984841 LOC100133331 TAS1R3 FAAP20 ACAP3 OR4F29 TTLL10-AS1 TMEM240 PLEKHN1 TNFRSF18 UBE2J2 TTLL10 LOC284600 B3GALT6 LOC102725121 FAM132A CDK11A CCNL2 FNDC10 SAMD11 FAM41C LOC100129534 MORN1 MIR200B LOC105378947 LOC105378949 LOC101928626 LINC01342 CFAP74 MTND2P28 LOC100506504 LOC100288069 MIR200A MIR429 MIR6859-1 FAM87B SCNN1D CALML6 LOC107985729 LOC105378948 NADK LOC100134822 LINC01128 C1orf159 SLC35E2B CPTP MMP23B LINC00115 SKI MIR1302-2 LOC100130417 ANKRD65 SLC35E2 AURKAIP1 KLHL17 AGRN GABRD RNF223 MIR6723 MXRA8 DDX11L1 PRKCZ HES4 TMEM52 MIR6859-2 TNFRSF4 LOC100288175 MIR6726 MRPL20 MIR6808 CPSF3L MIB2 CDK11B LOC100287934 PERM1 DVL1 OR4F16 ATAD3A MMP23A ATAD3B SDF4 LOC148413 FAM138A LOC102724312 LOC729737 LOC100132287 LOC105378591 MIR6727 TMEM88B OR4F5 MTND1P23 NOC2L ATAD3C LOC105378592 LOC105378589 VWA1 WASH7P GNB1 SSU72
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion KLHL17 LOC105378948 LOC100288175 ISG15 LOC107985728 AGRN C1orf159 NOC2L SAMD11 RNF223 PLEKHN1 LOC100130417 PERM1 HES4 LOC284600
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion PLEKHN1 KLHL17 LOC107985728 LOC100130417 PERM1 NOC2L SAMD11 LOC284600
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain KLHL17 LINC01342 SDF4 ISG15 LOC107985728 AGRN TTLL10-AS1 RNF223 PLEKHN1 MIR200A TNFRSF18 MIR429 HES4 TTLL10 TNFRSF4 LOC284600 LOC105378948 LOC100288175 C1orf159 NOC2L SAMD11 FAM41C LOC100130417 PERM1 MIR200B
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss KLHL17 PUSL1 ISG15 LOC107985728 TAS1R3 AGRN ACAP3 TTLL10-AS1 TMEM240 RNF223 PLEKHN1 MXRA8 TNFRSF18 UBE2J2 HES4 TTLL10 TNFRSF4 LOC284600 B3GALT6 FAM132A LOC100288175 MIR6726 CDK11A CCNL2 MRPL20 FNDC10 MIR6808 SAMD11 CPSF3L FAM41C MIB2 CDK11B LOC100287934 PERM1 DVL1 ATAD3A MMP23A MIR200B ATAD3B LINC01342 SDF4 LOC148413 LOC102724312 LOC100288069 MIR200A MIR6727 MIR429 FAM87B SCNN1D LOC107985729 TMEM88B LOC105378948 NADK LINC01128 C1orf159 SLC35E2B NOC2L ATAD3C CPTP MMP23B LINC00115 VWA1 LOC100130417 ANKRD65 SSU72 SLC35E2 AURKAIP1
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain KLHL17 LOC101928626 ISG15 LOC107985728 LOC107984841 LOC100133331 MTND2P28 AGRN RNF223 LOC100288069 PLEKHN1 MIR6723 HES4 FAM87B LOC284600 LOC105378948 LOC100288175 LINC01128 C1orf159 MTND1P23 NOC2L SAMD11 LINC00115 FAM41C LOC100287934 LOC100130417 PERM1 OR4F16 LOC105378947
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss KLHL17 LINC01342 SDF4 ISG15 LOC107985728 AGRN TTLL10-AS1 RNF223 PLEKHN1 MIR200A TNFRSF18 MIR429 UBE2J2 HES4 TTLL10 TNFRSF4 FAM87B LOC284600 B3GALT6 FAM132A LOC105378948 LOC100288175 LINC01128 C1orf159 NOC2L SAMD11 LINC00115 FAM41C LOC100130417 PERM1 MIR200B
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain KLHL17 LOC105378948 LOC100288175 LINC01342 ISG15 AGRN C1orf159 NOC2L SAMD11 RNF223 PLEKHN1 PERM1 HES4
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion KLHL17 LOC105378948 LOC100288175 LINC01342 SDF4 ISG15 AGRN C1orf159 NOC2L TTLL10-AS1 SAMD11 RNF223 PLEKHN1 MIR200A TNFRSF18 MIR429 PERM1 MIR200B HES4 TTLL10 TNFRSF4
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss PLEKHN1 KLHL17 ISG15 LOC107985728 LOC100130417 PERM1 AGRN HES4 NOC2L SAMD11 LOC284600
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain KLHL17 PUSL1 LINC01342 SDF4 LOC148413 ISG15 LOC107985728 TAS1R3 AGRN ACAP3 TTLL10-AS1 RNF223 PLEKHN1 MIR200A MXRA8 MIR6727 TNFRSF18 MIR429 UBE2J2 HES4 TTLL10 TNFRSF4 SCNN1D LOC284600 B3GALT6 TMEM88B FAM132A LOC105378948 LOC100288175 MIR6726 CCNL2 MRPL20 MIR6808 C1orf159 NOC2L SAMD11 CPTP CPSF3L LOC100130417 PERM1 DVL1 ANKRD65 MIR200B AURKAIP1
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain PLEKHN1 KLHL17 FAM41C LOC107985728 LOC100130417 PERM1 LINC01128 HES4 NOC2L SAMD11 LOC284600

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Process(es)


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