Assay Details
Target Gene Details
Entrez Gene ID: | 85441 |
Gene Name: | helicase with zinc finger 2 |
Gene Aliases: |
PDIP-1, PRIC285 |
Location: |
Chr.20:63558086-63574239 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HELZ2 | NM_001037335.2 | 20 | 8792 | NP_001032412.2 |
NM_033405.3 | 14 | 6297 | NP_208384.3 | |
AB051556.2 | 14 | 6297 | ||
AB201715.1 | 19 | 7970 | BAE46995.1 | |
AF517673.1 | 14 | 6617 | AAM74197.1 | |
AK055611.1 | 9 | 1329 | BAB70969.1 | |
AK074171.1 | 12 | 3326 | BAB84997.1 | |
BC150283.1 | 14 | 6297 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv586578 | Chr.20:63558992 - 63570431 on Build GRCh38 | Loss | HELZ2 |
nsv953306 | Chr.20:63151949 - 63571247 on Build GRCh38 | Deletion | LOC100130152 SRMS ARFGAP1 YTHDF1 COL20A1 CHRNA4 LOC102723788 FNDC11 MIR124-3 EEF1A2 FLJ16779 MIR3196 NKAIN4 PTK6 HELZ2 BIRC7 PPDPF LOC107985425 LOC100130587 KCNQ2 MIR4326 |
nsv586573 | Chr.20:63535645 - 63560584 on Build GRCh38 | Loss | SRMS PTK6 HELZ2 FNDC11 |
nsv521734 | Chr.20:63522433 - 63566995 on Build GRCh38 | Loss | SRMS PTK6 HELZ2 FNDC11 |
nsv9825 | Chr.20:62775470 - 63601330 on Build GRCh38 | Gain | LOC100130152 SRMS YTHDF1 COL20A1 HAR1A CHRNA4 LINC00029 DPH3P1 FNDC11 SLC17A9 OGFR-AS1 MIR3196 PTK6 HELZ2 DIDO1 BIRC7 LOC107985425 TCFL5 MRGBP GMEB2 KCNQ2 MIR4326 ARFGAP1 OGFR LOC107985428 LOC63930 LOC102723788 MIR124-3 EEF1A2 FLJ16779 LINC01056 HAR1B COL9A3 NKAIN4 PPDPF LINC00659 LOC100130587 GID8 BHLHE23 |
esv2722937 | Chr.20:63559306 - 63559887 on Build GRCh38 | Deletion | HELZ2 |
nsv470563 | Chr.20:63486715 - 63793308 on Build GRCh38 | Loss | SRMS ZGPAT FNDC11 ZBTB46 LIME1 EEF1A2 STMN3 RTEL1 TNFRSF6B PTK6 LOC100505771 HELZ2 PPDPF GMEB2 SLC2A4RG ARFRP1 RTEL1-TNFRSF6B |
nsv834034 | Chr.20:63462825 - 63625901 on Build GRCh38 | Loss | SRMS PTK6 HELZ2 FNDC11 EEF1A2 PPDPF GMEB2 KCNQ2 |
nsv517702 | Chr.20:63540916 - 63581575 on Build GRCh38 | Loss | SRMS HELZ2 FNDC11 |
esv2758806 | Chr.20:63470996 - 63745014 on Build GRCh38 | Gain+Loss | SRMS ZGPAT FNDC11 ZBTB46 LIME1 EEF1A2 STMN3 RTEL1 TNFRSF6B PTK6 LOC100505771 HELZ2 PPDPF GMEB2 SLC2A4RG KCNQ2 ARFRP1 RTEL1-TNFRSF6B |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |