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Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:972132 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02428354_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 8 - Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
XM_017002478.1 XP_016857967.1
XM_017002479.1 XP_016857968.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain LOC100288175 PLEKHN1 ISG15 HES4 KLHL17 LOC284600 C1orf159 PERM1 RNF223 LOC100130417 SAMD11 NOC2L LOC107985728 AGRN LOC105378948
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC107985729 LOC100288175 CPSF3L SLC35E2 LOC100288069 AURKAIP1 C1orf159 TMEM88B NADK LOC105378949 CCNL2 GABRD MIR1302-2 PRKCZ MIR6859-1 MMP23B CDK11B MTND1P23 TTLL10-AS1 CDK11A GNB1 ANKRD65 SDF4 MXRA8 MTND2P28 B3GALT6 MORN1 MIR6808 LOC148413 LOC105378948 CFAP74 FAM41C LOC729737 DDX11L1 VWA1 MIR200B CPTP LOC100130417 MIR6859-2 ATAD3B CALML6 LOC107985728 FNDC10 PLEKHN1 MIR6726 LOC105378591 LINC01128 LOC100133331 LINC01342 LOC100287934 RNF223 MRPL20 LOC100134822 MIB2 MIR6727 LOC100129534 DVL1 OR4F29 KLHL17 SCNN1D FAM138A MIR6723 MIR429 MIR200A FAM87B FAAP20 NOC2L LOC102725121 LOC100132287 TMEM240 LOC284600 SLC35E2B SKI PERM1 TNFRSF18 PUSL1 WASH7P LOC105378589 AGRN TMEM52 LOC105378592 LOC101928626 ATAD3C OR4F5 HES4 TTLL10 LOC102724312 TAS1R3 OR4F16 ATAD3A ACAP3 LINC00115 ISG15 LOC107984841 SSU72 UBE2J2 FAM132A LOC100506504 TNFRSF4 SAMD11 LOC105378947 MMP23A
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion LOC100288175 PLEKHN1 ISG15 HES4 KLHL17 LOC284600 C1orf159 PERM1 RNF223 LOC100130417 SAMD11 NOC2L LOC107985728 AGRN LOC105378948
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion PLEKHN1 LOC100130417 KLHL17 LOC284600 SAMD11 NOC2L LOC107985728 PERM1
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC100288175 HES4 KLHL17 TTLL10 FAM41C C1orf159 MIR429 MIR200A MIR200B LOC100130417 NOC2L LOC107985728 PLEKHN1 ISG15 LOC284600 TTLL10-AS1 LINC01342 SDF4 PERM1 RNF223 TNFRSF4 TNFRSF18 SAMD11 AGRN LOC105378948
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC107985729 LOC100288175 DVL1 CPSF3L SLC35E2 LOC100288069 KLHL17 SCNN1D AURKAIP1 C1orf159 MIR429 MIR200A TMEM88B NADK CCNL2 FAM87B NOC2L MMP23B CDK11B TMEM240 LOC284600 TTLL10-AS1 SLC35E2B CDK11A ANKRD65 SDF4 PERM1 MXRA8 B3GALT6 TNFRSF18 PUSL1 MIR6808 LOC148413 AGRN LOC105378948 ATAD3C HES4 TTLL10 FAM41C VWA1 LOC102724312 MIR200B TAS1R3 CPTP LOC100130417 ATAD3B LOC107985728 FNDC10 ATAD3A PLEKHN1 ACAP3 LINC00115 ISG15 MIR6726 LINC01128 SSU72 LINC01342 UBE2J2 FAM132A LOC100287934 RNF223 TNFRSF4 MRPL20 SAMD11 MIB2 MIR6727 MMP23A
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC101928626 LOC100288175 LOC100288069 HES4 KLHL17 MIR6723 FAM41C C1orf159 FAM87B LOC100130417 OR4F16 NOC2L LOC107985728 PLEKHN1 MTND1P23 LINC00115 ISG15 LOC107984841 LOC284600 LINC01128 LOC100133331 LOC100287934 PERM1 RNF223 MTND2P28 SAMD11 LOC105378947 AGRN LOC105378948
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss LOC100288175 HES4 KLHL17 TTLL10 FAM41C C1orf159 MIR429 MIR200A MIR200B FAM87B LOC100130417 NOC2L LOC107985728 PLEKHN1 LINC00115 ISG15 LOC284600 LINC01128 TTLL10-AS1 LINC01342 UBE2J2 FAM132A SDF4 PERM1 RNF223 TNFRSF4 B3GALT6 TNFRSF18 SAMD11 AGRN LOC105378948
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain LOC100288175 PLEKHN1 ISG15 HES4 KLHL17 C1orf159 LINC01342 PERM1 RNF223 SAMD11 NOC2L AGRN LOC105378948
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion LOC100288175 PLEKHN1 ISG15 HES4 KLHL17 TTLL10 TTLL10-AS1 C1orf159 MIR429 MIR200A LINC01342 MIR200B SDF4 PERM1 RNF223 TNFRSF4 TNFRSF18 SAMD11 NOC2L AGRN LOC105378948
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss PLEKHN1 LOC100130417 ISG15 HES4 KLHL17 LOC284600 SAMD11 NOC2L LOC107985728 AGRN PERM1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain LOC100288175 DVL1 CPSF3L HES4 KLHL17 TTLL10 SCNN1D AURKAIP1 C1orf159 MIR429 MIR200A TMEM88B MIR200B TAS1R3 CPTP CCNL2 LOC100130417 NOC2L LOC107985728 PLEKHN1 ACAP3 ISG15 MIR6726 LOC284600 TTLL10-AS1 LINC01342 UBE2J2 ANKRD65 FAM132A SDF4 PERM1 MXRA8 RNF223 TNFRSF4 B3GALT6 TNFRSF18 PUSL1 MRPL20 MIR6808 SAMD11 MIR6727 LOC148413 AGRN LOC105378948
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain PLEKHN1 LOC100130417 HES4 KLHL17 LOC284600 FAM41C LINC01128 SAMD11 NOC2L LOC107985728 PERM1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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