Assay Details
Target Gene Details
Entrez Gene ID: | 79680 |
Gene Name: | chromosome 22 open reading frame 29 |
Gene Aliases: |
BOP |
Location: |
Chr.22:19846138-19854848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C22orf29 | NM_024627.5 | 3 | 6458 | NP_078903.3 |
AK026924.1 | 1 | 2405 | ||
BX640969.1 | 3 | 6427 | CAE45984.1 | |
BX640998.1 | 3 | 6427 | CAE46001.1 |
Target Gene Details
Entrez Gene ID: | 54584 |
Gene Name: | G protein subunit beta 1 like |
Gene Aliases: |
DGCRK3, FKSG1, GY2, WDR14, WDVCF |
Location: |
Chr.22:19788411-19854939 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GNB1L | NM_053004.2 | NP_443730.1 | ||
AB051432.1 | ||||
AF238328.1 | AAG36826.1 | |||
AF301895.1 | AAG53933.1 | |||
AY007378.1 | AAG12162.1 | |||
BC012060.1 | AAH12060.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | C22orf29 GP1BB SEPT5-GP1BB TBX1 SEPT5 TXNRD2 GNB1L |
nsv953024 | Chr.22:19842078 - 19854877 on Build GRCh38 | Deletion | C22orf29 GNB1L |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | CLDN5 MIR1286 MIR185 RANBP1 SEPT5-GP1BB SEPT5 TXNRD2 RTN4R GNB1L UFD1L MIR6816 CDC45 CCDC188 LINC00895 ARVCF MIR1306 MIR4761 GP1BB DGCR6L TBX1 LOC440792 LOC284865 LINC00896 MIR3618 C22orf29 COMT DGCR8 TANGO2 ZDHHC8 TRMT2A LOC101927859 |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | MIR1286 MIR185 RANBP1 SEPT5-GP1BB SEPT5 TXNRD2 RTN4R GNB1L MIR6816 CCDC188 ARVCF MIR1306 MIR4761 GP1BB DGCR6L TBX1 LOC440792 LOC284865 LINC00896 MIR3618 C22orf29 COMT DGCR8 TANGO2 ZDHHC8 TRMT2A |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | MIR1286 MIR185 RANBP1 SEPT5-GP1BB SEPT5 TXNRD2 RTN4R GNB1L MIR6816 CCDC188 ARVCF MIR1306 MIR4761 GP1BB DGCR6L TBX1 LOC440792 LOC284865 LINC00896 MIR3618 C22orf29 COMT DGCR8 TANGO2 ZDHHC8 TRMT2A |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | C22orf29 TXNRD2 GNB1L |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | C22orf29 TBX1 TXNRD2 GNB1L |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | C22orf29 GP1BB SEPT5-GP1BB TBX1 SEPT5 TXNRD2 GNB1L |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | MIR1286 DGCR6L MIR185 RANBP1 TBX1 LOC440792 LOC284865 TXNRD2 LINC00896 RTN4R GNB1L MIR6816 MIR3618 CCDC188 C22orf29 ARVCF COMT DGCR8 MIR1306 MIR4761 TANGO2 ZDHHC8 TRMT2A |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | CLDN5 GSC2 SEPT5-GP1BB LOC100996415 DGCR11 SEPT5 DGCR14 TXNRD2 C22orf39 GNB1L UFD1L HIRA DGCR5 CDC45 LINC00895 CLTCL1 TSSK2 MIR4761 MRPL40 PRODH LOC100996401 DGCR10 LOC642643 GGT3P PI4KAP1 GP1BB DGCR9 LINC01311 FAM230A USP18 DGCR2 TBX1 TMEM191B RIMBP3 DGCR6 C22orf29 SLC25A1 LOC102725072 COMT LOC729461 LOC100996432 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |