Assay Details
Target Gene Details
Entrez Gene ID: | 57466 |
Gene Name: | SR-related CTD associated factor 4 |
Gene Aliases: |
SFRS15, SRA4 |
Location: |
Chr.21:31671000-31732118 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SCAF4 | NM_001145444.1 | 19 | 3759 | NP_001138916.1 |
NM_001145445.1 | 20 | 3738 | NP_001138917.1 | |
NM_020706.2 | 20 | 3804 | NP_065757.1 | |
XM_005261017.2 | 19 | 3608 | XP_005261074.1 | |
XM_006724035.2 | 20 | 3773 | XP_006724098.1 | |
XM_006724036.2 | 20 | 3707 | XP_006724099.1 | |
XM_017028415.1 | 20 | 3762 | XP_016883904.1 | |
XM_017028416.1 | 20 | 3581 | XP_016883905.1 | |
XM_017028417.1 | 19 | 3542 | XP_016883906.1 | |
AB032998.1 | 14 | 2726 | BAA86486.1 | |
AF023142.1 | 20 | 3403 | AAD09327.1 | |
AK025748.1 | 15 | 2757 | ||
AK027017.1 | 6 | 1549 | ||
AK308406.1 | 19 | 3610 | ||
AL834304.1 | 20 | 3518 | CAD38974.2 | |
BC014921.1 | 20 | 3781 | ||
BC043353.1 | 20 | 3761 | ||
BC052286.1 | 20 | 3635 | ||
BC064990.1 | 20 | 3635 | AAH64990.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv519899 | Chr.21:31509375 - 31691041 on Build GRCh38 | Gain | SOD1 LOC102724449 SCAF4 TIAM1 LOC150051 |
nsv1067151 | Chr.21:31374681 - 32180843 on Build GRCh38 | Gain | LINC00159 SOD1 LOC102724449 SCAF4 HUNK TIAM1 LOC150051 |
esv3575385 | Chr.21:31000408 - 31807461 on Build GRCh38 | Gain | SOD1 LOC102724449 SCAF4 KRTAP19-8 TIAM1 LOC150051 |
nsv834079 | Chr.21:31604633 - 31781547 on Build GRCh38 | Loss | SOD1 LOC102724449 SCAF4 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |