Assay Details
Target Gene Details
Entrez Gene ID: | 84879 |
Gene Name: | major facilitator superfamily domain containing 2A |
Gene Aliases: |
MCPH15, MFSD2, NLS1 |
Location: |
Chr.1:39955112-39969968 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MFSD2A | NM_001136493.2 | 4 | 625 | NP_001129965.1 |
NM_001287808.1 | 2 | 326 | NP_001274737.1 | |
NM_001287809.1 | 4 | 475 | NP_001274738.1 | |
NM_032793.4 | 4 | 586 | NP_116182.2 | |
NR_109896.1 | 4 | 586 | ||
XM_005271285.1 | 4 | 550 | XP_005271342.1 | |
XM_011542312.2 | 4 | 553 | XP_011540614.1 | |
AB073383.1 | 4 | 550 | BAD38634.1 | |
AF289609.1 | 4 | 542 | AAL55793.1 | |
AF370364.1 | 1 | 1053 | AAQ15200.1 | |
AK074186.1 | 4 | 491 | ||
AK075183.1 | 4 | 553 | BAC11456.1 | |
AK093223.1 | 4 | 587 | BAC04100.1 | |
AK291540.1 | 4 | 548 | ||
AK297991.1 | 4 | 439 | ||
AK301533.1 | 2 | 293 | ||
AL834184.1 | 4 | 540 | ||
AY358636.1 | 4 | 567 | AAQ88999.1 | |
BC011587.1 | 4 | 560 | AAH11587.1 | |
BC092414.1 | 4 | 528 | AAH92414.1 | |
BP321361.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2758933 | Chr.1:39759471 - 40194760 on Build GRCh38 | Loss | PPIE CAP1 OXCT2 TRIT1 MYCL BMP8B LOC101929536 MFSD2A RLF PPT1 |
nsv945896 | Chr.1:39960837 - 39965664 on Build GRCh38 | Duplication | MFSD2A |
More Information
Additional Information:
For this assay, SNP(s) [rs115805986] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |