Assay Details
Target Gene Details
Entrez Gene ID: | 9146 |
Gene Name: | hepatocyte growth factor-regulated tyrosine kinase substrate |
Gene Aliases: |
HRS |
Location: |
Chr.17:81683932-81702121 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 6 - Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HGS | NM_004712.4 | NP_004703.1 | ||
XM_011525463.2 | XP_011523765.1 | |||
XM_017025297.1 | XP_016880786.1 | |||
XM_017025298.1 | XP_016880787.1 | |||
AF260566.1 | AAF82361.1 | |||
AK294190.1 | ||||
AK303800.1 | ||||
BC003565.1 | AAH03565.1 | |||
BT009754.1 | AAP88756.1 | |||
D84064.1 | BAA23366.1 | |||
DR001213.1 | ||||
KU178466.1 | ||||
KU178467.1 | ||||
U43895.1 | AAC51929.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv26223 | Chr.17:80659041 - 81736487 on Build GRCh38 | Gain+Loss | TSPAN10 AATK MRPL12 BAHCC1 LOC101928855 AATK-AS1 FAAP100 ARL16 C17orf89 BAIAP2-AS1 OXLD1 LOC100129503 MIR1250 MIR657 MIR6786 MIR3065 TEPSIN MIR4740 LOC400627 LOC105371925 PDE6G LOC107985022 RPTOR CHMP6 MIR3186 LOC100130370 MIR338 FSCN2 SLC38A10 BAIAP2 HGS NPLOC4 LOC105371921 SLC25A10 TMEM105 ACTG1 CCDC137 CEP131 LOC107985021 LINC00482 |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | AATK BAHCC1 RFNG AATK-AS1 ANAPC11 ARL16 MAFG NPB SLC16A3 LRRC45 LOC105371944 DUS1L WDR45B ASPSCR1 OXLD1 LOC101929552 MAFG-AS1 P4HB NOTUM C17orf62 LOC105376790 ZNF750 TEPSIN MIR4740 FN3K PPP1R27 PDE6G SIRT7 MIR3186 LOC101929511 FSCN2 MIR6787 MIR4525 PCYT2 NPLOC4 UTS2R OGFOD3 NARF ACTG1 CCDC137 HEXDC TSPAN10 MRPL12 FAAP100 SECTM1 C17orf89 CCDC57 ARHGDIA PYCR1 FOXK2 RAB40B LOC105376791 SNORD134 MIR6786 B3GNTL1 FASN DCXR LOC105371925 ALYREF LOC100130370 CSNK1D CD7 SLC38A10 FN3KRP HGS STRA13 MYADML2 GPS1 RAC3 SLC25A10 GCGR TMEM105 TEX19 TBCD MCRIP1 CEP131 LINC00482 |
nsv470620 | Chr.17:81516973 - 82064485 on Build GRCh38 | Loss | TSPAN10 MRPL12 RFNG FAAP100 ANAPC11 ARL16 MAFG NPB LRRC45 DUS1L ARHGDIA ASPSCR1 PYCR1 OXLD1 MAFG-AS1 P4HB NOTUM MIR6786 DCXR PPP1R27 ALYREF PDE6G SIRT7 FSCN2 HGS PCYT2 STRA13 MYADML2 NPLOC4 GPS1 RAC3 SLC25A10 GCGR CCDC137 MCRIP1 |
nsv952390 | Chr.17:81637175 - 81860124 on Build GRCh38 | Deletion | TSPAN10 MRPL12 MIR6786 ARL16 PPP1R27 PDE6G HGS OXLD1 SLC25A10 GCGR CCDC137 MCRIP1 P4HB |
More Information
Additional Information:
For this assay, SNP(s) [rs118146126] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |