Assay Details
Target Gene Details
Entrez Gene ID: | 26512 |
Gene Name: | integrator complex subunit 6 |
Gene Aliases: |
DBI-1, DDX26, DDX26A, DICE1, HDB, INT6, Notchl2 |
Location: |
Chr.13:51353171-51453236 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
INTS6 | NM_001039937.1 | 19 | 6115 | NP_001035026.1 |
NM_001306091.1 | 20 | 6891 | NP_001293020.1 | |
NM_012141.2 | 18 | 6607 | NP_036273.1 | |
XM_011535040.2 | XP_011533342.1 | |||
AA262171.1 | 1 | 372 | ||
BX116410.1 | 1 | 53 |
Target Gene Details
Entrez Gene ID: | 647174 |
Gene Name: | serpin family E member 3 |
Gene Aliases: |
- |
Location: |
Chr.13:51334976-51362391 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SERPINE3 | XM_017020707.1 | XP_016876196.1 | ||
AM402969.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv832611 | Chr.13:51192336 - 51364178 on Build GRCh38 | Loss | MIR5693 SERPINE3 INTS6 FAM124A |
nsv561618 | Chr.13:49907577 - 51521449 on Build GRCh38 | Loss | MIR5693 MIR16-1 MIR15A DLEU2 DLEU1 MIR3613 INTS6 FAM124A RNASEH2B KCNRG SPRYD7 ST13P4 GUCY1B2 DLEU7-AS1 INTS6-AS1 LINC00371 RNASEH2B-AS1 DLEU1-AS1 SERPINE3 DLEU7 TRIM13 |
More Information
Additional Information:
For this assay, SNP(s) [rs112585939] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Non-exonic DGV Variation |