Hs02221448_cn

• Gene Symbol: FUBP1
• Assay Reference Genome Location: Chr.1:77956722 on build GRCh38
• Cytoband: 1p31.1

Target Gene Details

• Entrez Gene ID: 8880
• Gene Name: far upstream element binding protein 1
• Gene Aliases: FBP, FUBP, hDH V
• Location: Chr.1:77944055-77979494 on Build GRCh38
• Assay Gene Location: Overlaps Intron 18 - Exon 19

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FUBP1	NM_001303433.1			NP_001290362.1
	NM_003902.4			NP_003893.2
	NR_130152.1
	XM_011542391.2			XP_011540693.1
	XM_011542392.2			XP_011540694.1
	XM_011542393.2			XP_011540695.1
	XM_017002739.1			XP_016858228.1
	XM_017002740.1			XP_016858229.1
	XM_017002741.1			XP_016858230.1
	XM_017002742.1			XP_016858231.1
	XM_017002743.1			XP_016858232.1
	XM_017002744.1			XP_016858233.1
	AB209366.1			BAD92603.1
	AK300032.1
	AK301581.1
	AK303568.1
	BC017247.2			AAH17247.1
	U05040.2			AAA17976.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv518855	Chr.1:77950984 - 77990671 on Build GRCh38	Loss	DNAJB4 FUBP1

More Information

Additional Information:

For this assay, SNP(s) [rs369403301] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
positive regulation of gene expression

Function(s)

single-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
poly(A) RNA binding