Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | 1 | 247 | NP_001116295.1 |
NM_001286709.1 | 1 | 247 | NP_001273638.1 | |
NM_012087.3 | 1 | 247 | NP_036219.2 | |
XM_005272234.3 | 1 | 242 | XP_005272291.1 | |
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | 1 | 202 | AAD41476.1 | |
AK055092.1 | 1 | 209 | ||
AK225761.1 | 1 | 214 | ||
AK311481.1 | 1 | 212 | ||
BC011355.1 | 1 | 191 | AAH11355.1 | |
BC017337.2 | 1 | 170 | AAH17337.1 | |
DB194811.1 | 1 | 247 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | SNORD141A ADAMTSL2 ABO SURF2 LOC101928193 SURF4 LOC100996574 PPP1R26-AS1 CACFD1 RPL7A SNORD36A MIR3689E LCN1 AK8 REXO4 SNORD36C LOC101928525 DBH MIR3689A SURF1 GFI1B COL5A1 MRPS2 TMEM8C STKLD1 MIR4669 TSC1 MIR3689C ADAMTS13 SNORD24 SARDH LOC101448202 MIR3689B SURF6 RNU6ATAC C9orf116 RALGDS GBGT1 C9orf62 BRD3 MIR548AW OLFM1 FCN1 LOC100130548 CEL COL5A1-AS1 MIR3689F FCN2 LOC105376306 CELP SPACA9 GTF3C5 MED22 MIR3689D2 MIR6877 VAV2 WDR5 OBP2B FAM163B RXRA SLC2A6 DBH-AS1 LOC401557 LINC00094 SNORD36B MIR3689D1 PPP1R26 |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | LOC105376306 GTF3C5 MIR6877 CEL LOC100996574 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | SNORD141A LOC105376306 CELP GTF3C5 RALGDS GFI1B MIR6877 GBGT1 CEL LOC100996574 |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | SNORD141A LOC105376306 GTF3C5 MIR6877 CEL LOC100996574 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |