Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | 1 | 247 | NP_001116295.1 |
NM_001286709.1 | 1 | 247 | NP_001273638.1 | |
NM_012087.3 | 1 | 247 | NP_036219.2 | |
XM_005272234.3 | 1 | 242 | XP_005272291.1 | |
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | 1 | 202 | AAD41476.1 | |
AK055092.1 | 1 | 209 | ||
AK225761.1 | 1 | 214 | ||
AK311481.1 | 1 | 212 | ||
BC011355.1 | 1 | 191 | AAH11355.1 | |
BC017337.2 | 1 | 170 | AAH17337.1 | |
DB194811.1 | 1 | 247 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | ADAMTSL2 RXRA LOC100130548 REXO4 SNORD36C TSC1 OLFM1 GTF3C5 MED22 SLC2A6 SNORD24 BRD3 ABO MIR3689A AK8 DBH PPP1R26 MIR6877 PPP1R26-AS1 CELP SURF4 LOC100996574 SNORD36B LOC101928193 SPACA9 MIR3689F MIR3689B MIR548AW FCN1 LOC101928525 GFI1B STKLD1 COL5A1 LOC401557 FAM163B WDR5 SURF6 MIR4669 COL5A1-AS1 LCN1 C9orf62 MIR3689E MRPS2 C9orf116 CACFD1 OBP2B SURF1 RALGDS MIR3689C SNORD36A SNORD141A GBGT1 LOC105376306 TMEM8C VAV2 SARDH RNU6ATAC LOC101448202 ADAMTS13 MIR3689D2 FCN2 RPL7A MIR3689D1 DBH-AS1 SURF2 LINC00094 CEL |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | LOC105376306 LOC100996574 MIR6877 GTF3C5 CEL |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | GFI1B RALGDS SNORD141A GBGT1 CELP LOC105376306 LOC100996574 MIR6877 GTF3C5 CEL |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | SNORD141A LOC105376306 LOC100996574 MIR6877 GTF3C5 CEL |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |