Assay Details
Target Gene Details
Entrez Gene ID: | 152992 |
Gene Name: | tRNA methyltransferase 44 homolog (S. cerevisiae) |
Gene Aliases: |
C4orf23, METTL19, TRM44 |
Location: |
Chr.4:8440774-8512531 on Build GRCh38 |
Assay Gene Location: | Within Exon 12 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TRMT44 | NM_152544.2 | 9 | 1878 | NP_689757.2 |
XM_005247950.3 | 9 | 1875 | XP_005248007.1 | |
XM_011513406.2 | 9 | 1907 | XP_011511708.1 | |
XM_011513407.2 | 9 | 1907 | XP_011511709.1 | |
XM_011513408.1 | 10 | 2019 | XP_011511710.1 | |
XM_011513409.2 | 10 | 1990 | XP_011511711.1 | |
AK093044.1 | 5 | 884 | BAC04031.1 | |
BC035655.1 | 9 | 1378 | AAH35655.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3599546 | Chr.4:8466654 - 8480403 on Build GRCh38 | Loss | TRMT44 |
nsv1002794 | Chr.4:8108356 - 8489207 on Build GRCh38 | Gain | ABLIM2 TRMT44 SH3TC1 ACOX3 HTRA3 |
nsv1005698 | Chr.4:8434559 - 10248775 on Build GRCh38 | Gain | HMX1 USP17L11 USP17L24 OR7E35P FAM86KP MIR548I2 USP17L19 USP17L22 USP17L9P LOC650293 DEFB131 USP17L25 USP17L18 TRMT44 USP17L27 OR7E85P ACOX3 USP17L15 USP17L6P USP17L5 SLC2A9 USP17L17 USP17L30 USP17L26 DRD5 USP17L21 WDR1 LOC101928532 USP17L28 USP17L12 USP17L10 USP17L13 LOC100133128 CPZ GPR78 USP17L29 MIR3138 USP17L20 |
nsv829854 | Chr.4:8401194 - 8504680 on Build GRCh38 | Gain+Loss | TRMT44 ACOX3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |