Assay Details
Target Gene Details
Entrez Gene ID: | 129138 |
Gene Name: | ankyrin repeat domain 54 |
Gene Aliases: |
LIAR |
Location: |
Chr.22:37830854-37848994 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ANKRD54 | NM_138797.2 | NP_620152.1 | ||
NR_036556.1 | ||||
XM_011529877.2 | 1 | 323 | XP_011528179.1 | |
XM_011529878.2 | XP_011528180.1 | |||
XM_011529883.2 | XP_011528185.1 | |||
XM_017028590.1 | XP_016884079.1 | |||
XM_017028593.1 | 1 | 302 | XP_016884082.1 | |
BC014641.1 | AAH14641.1 | |||
BC066909.1 | AAH66909.1 | |||
BX401122.2 | ||||
CR456471.1 | CAG30357.1 |
Target Gene Details
Entrez Gene ID: | 724028 |
Gene Name: | microRNA 658 |
Gene Aliases: |
MIRN658, hsa-mir-658 |
Location: |
Chr.22:37844272-37844371 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MIR658 | NR_030395.1 | 1 | 57 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2758838 | Chr.22:37607870 - 37869871 on Build GRCh38 | Loss | SH3BP1 EIF3L MIR658 NOL12 LGALS1 MIR659 PDXP GALR3 LOC101927051 GCAT H1F0 TRIOBP LOC102724378 ANKRD54 GGA1 |
esv2666189 | Chr.22:37839635 - 37847101 on Build GRCh38 | Deletion | MIR658 ANKRD54 |
esv3647720 | Chr.22:37839586 - 37847329 on Build GRCh38 | Loss | MIR658 ANKRD54 |
esv3893482 | Chr.22:37832559 - 37927500 on Build GRCh38 | Gain | EIF3L MIR658 MICALL1 MIR659 ANKRD54 |
More Information
Additional Information:
For this assay, SNP(s) [rs141002682] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |