Assay Details
Target Gene Details
Entrez Gene ID: | 6414 |
Gene Name: | selenoprotein P, plasma, 1 |
Gene Aliases: |
SELP, SEPP, SeP |
Location: |
Chr.5:42799880-42811922 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SEPP1 | NM_001085486.1 | 3 | 255 | NP_001078955.1 |
NM_001093726.1 | 3 | 314 | NP_001087195.1 | |
NM_005410.2 | 2 | 226 | NP_005401.3 | |
AK096125.1 | 2 | 595 | ||
AK225801.1 | 3 | 225 | ||
AK311392.1 | 2 | 563 | ||
AL833145.1 | 2 | 197 | ||
AU136519.2 | 3 | 284 | ||
BC015875.1 | 2 | 200 | AAH15875.1 | |
BC040075.1 | 2 | 176 | AAH40075.1 | |
BC046152.1 | 2 | 177 | AAH46152.1 | |
BC058919.1 | 2 | 207 | AAH58919.1 | |
BI463468.1 | 2 | 371 | ||
Z11793.1 | 2 | 162 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv5637n100 | Chr.5:42609988 - 42844089 on Build GRCh38 | Gain | SEPP1 CCDC152 GHR |
nsv523033 | Chr.5:42751935 - 42919583 on Build GRCh38 | Gain | SEPP1 CCDC152 |
nsv597886 | Chr.5:42610307 - 42854306 on Build GRCh38 | Gain | SEPP1 CCDC152 GHR |
nsv597925 | Chr.5:42728729 - 43237086 on Build GRCh38 | Gain | FLJ32255 SEPP1 ANXA2R LOC100506639 CCDC152 LOC648987 LOC153684 LOC100132356 NIM1K ZNF131 |
More Information
Additional Information:
For this assay, SNP(s) [rs72554691] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |