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Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:974945 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02034745_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 15 2136 NP_001153656.1
NM_032129.2 16 2241 NP_115505.2
AL136730.1 16 2241 CAB66664.1
BC101386.2 15 2131 AAI01387.1
BC101387.2 15 2392 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain ISG15 NOC2L PLEKHN1 KLHL17 LOC107985728 C1orf159 RNF223 AGRN LOC100130417 HES4 LOC105378948 LOC100288175 PERM1 SAMD11 LOC284600
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss PLEKHN1 ACAP3 SSU72 LOC101928626 GNB1 LOC105378949 MIR1302-2 MMP23A FAM132A LOC729737 MTND2P28 DDX11L1 NADK MIR6808 OR4F29 TMEM240 MIR6727 C1orf159 FAM138A ATAD3A MXRA8 MIR200B FAM87B LOC100287934 FAM41C MIR200A ISG15 MRPL20 LOC100130417 HES4 SCNN1D LINC01342 CPSF3L SAMD11 LOC100134822 FAAP20 TAS1R3 CPTP MIR429 KLHL17 MIR6859-1 TTLL10-AS1 MIR6859-2 SKI MTND1P23 TTLL10 LOC102725121 LOC100288175 CALML6 ATAD3C LOC105378591 ATAD3B SLC35E2 LOC105378592 RNF223 LOC100506504 LOC100132287 TMEM52 CCNL2 OR4F16 OR4F5 LINC01128 AURKAIP1 LOC105378589 CDK11B CDK11A SDF4 UBE2J2 AGRN FNDC10 LINC00115 LOC105378948 B3GALT6 TMEM88B ANKRD65 DVL1 LOC284600 CFAP74 LOC100288069 MMP23B VWA1 LOC148413 LOC105378947 LOC107985729 TNFRSF18 LOC100133331 PUSL1 PERM1 TNFRSF4 NOC2L WASH7P LOC100129534 MIB2 LOC107985728 MIR6723 MORN1 GABRD SLC35E2B PRKCZ LOC107984841 LOC102724312 MIR6726
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion ISG15 NOC2L PLEKHN1 KLHL17 LOC107985728 C1orf159 RNF223 AGRN LOC100130417 HES4 LOC105378948 LOC100288175 PERM1 SAMD11 LOC284600
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion NOC2L PLEKHN1 KLHL17 LOC107985728 PERM1 SAMD11 LOC100130417 LOC284600
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain ISG15 PLEKHN1 RNF223 LOC100130417 HES4 LINC01342 TNFRSF18 PERM1 SAMD11 TNFRSF4 NOC2L MIR429 KLHL17 LOC107985728 SDF4 C1orf159 TTLL10-AS1 AGRN MIR200B LOC105378948 TTLL10 LOC100288175 FAM41C MIR200A LOC284600
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss PLEKHN1 ACAP3 SSU72 RNF223 MMP23A FAM132A CCNL2 LINC01128 NADK AURKAIP1 MIR6808 CDK11B CDK11A TMEM240 SDF4 MIR6727 C1orf159 UBE2J2 AGRN ATAD3A FNDC10 MXRA8 MIR200B LINC00115 FAM87B LOC105378948 B3GALT6 LOC100287934 TMEM88B ANKRD65 DVL1 FAM41C MIR200A LOC284600 ISG15 LOC100288069 MMP23B VWA1 LOC148413 MRPL20 LOC100130417 HES4 SCNN1D LINC01342 LOC107985729 TNFRSF18 PUSL1 PERM1 CPSF3L SAMD11 TNFRSF4 TAS1R3 NOC2L CPTP MIR429 MIB2 KLHL17 LOC107985728 TTLL10-AS1 SLC35E2B TTLL10 LOC100288175 LOC102724312 ATAD3C ATAD3B MIR6726 SLC35E2
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain ISG15 LOC100288069 PLEKHN1 LOC105378947 RNF223 LOC101928626 LOC100130417 HES4 LOC100133331 MTND2P28 PERM1 SAMD11 OR4F16 LINC01128 NOC2L KLHL17 LOC107985728 MIR6723 C1orf159 AGRN LINC00115 FAM87B LOC105378948 MTND1P23 LOC100288175 LOC107984841 LOC100287934 FAM41C LOC284600
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss ISG15 PLEKHN1 RNF223 LOC100130417 HES4 LINC01342 FAM132A TNFRSF18 PERM1 SAMD11 TNFRSF4 LINC01128 NOC2L MIR429 KLHL17 LOC107985728 SDF4 C1orf159 UBE2J2 TTLL10-AS1 AGRN MIR200B LINC00115 FAM87B LOC105378948 B3GALT6 TTLL10 LOC100288175 FAM41C MIR200A LOC284600
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain ISG15 NOC2L PLEKHN1 KLHL17 C1orf159 RNF223 AGRN HES4 LINC01342 LOC105378948 LOC100288175 PERM1 SAMD11
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion ISG15 NOC2L MIR429 PLEKHN1 KLHL17 SDF4 C1orf159 RNF223 TTLL10-AS1 AGRN HES4 LINC01342 MIR200B LOC105378948 TNFRSF18 TTLL10 LOC100288175 PERM1 SAMD11 TNFRSF4 MIR200A
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss ISG15 NOC2L PLEKHN1 KLHL17 LOC107985728 PERM1 SAMD11 AGRN LOC100130417 HES4 LOC284600
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain ISG15 LOC148413 PLEKHN1 ACAP3 RNF223 MRPL20 LOC100130417 HES4 SCNN1D LINC01342 FAM132A TNFRSF18 PUSL1 CCNL2 PERM1 CPSF3L SAMD11 TNFRSF4 AURKAIP1 TAS1R3 MIR6808 NOC2L CPTP MIR429 KLHL17 LOC107985728 SDF4 MIR6727 C1orf159 UBE2J2 TTLL10-AS1 AGRN MXRA8 MIR200B LOC105378948 B3GALT6 TTLL10 LOC100288175 TMEM88B ANKRD65 DVL1 MIR6726 MIR200A LOC284600
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain NOC2L PLEKHN1 KLHL17 LOC107985728 PERM1 SAMD11 LINC01128 LOC100130417 FAM41C HES4 LOC284600

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Process(es)


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