Assay Details
Target Gene Details
Entrez Gene ID: | 57657 |
Gene Name: | hyperpolarization activated cyclic nucleotide gated potassium channel 3 |
Gene Aliases: |
- |
Location: |
Chr.1:155277427-155289848 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HCN3 | NM_020897.2 | 8 | 2474 | NP_065948.1 |
NR_073074.1 | 8 | 2341 | ||
XM_011509816.2 | 8 | 2992 | XP_011508118.1 | |
XM_011509817.2 | 7 | 2312 | XP_011508119.1 | |
XM_011509818.2 | 7 | 1704 | XP_011508120.1 | |
XM_017001918.1 | 7 | 1686 | XP_016857407.1 | |
AB040968.2 | 8 | 2123 | BAA96059.2 | |
AF488550.1 | AAO49470.1 | |||
AK055840.1 | 7 | 2529 | ||
AK299333.1 | 8 | 2314 | ||
BC000066.1 | 7 | 1702 | AAH00066.1 | |
BC028024.1 | 5 | 1339 | AAH28024.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv3032 | Chr.1:155285619 - 155318185 on Build GRCh38 | Insertion | LOC105371451 PKLR HCN3 FDPS |
nsv831636 | Chr.1:155249432 - 155475073 on Build GRCh38 | Loss | RUSC1-AS1 LOC105371451 PKLR POU5F1P4 ASH1L HCN3 SCAMP3 FDPS FAM189B RUSC1 MIR555 CLK2 |
esv33869 | Chr.1:155253492 - 155948170 on Build GRCh38 | Loss | SCARNA26A DAP3 PKLR HCN3 RXFP4 POU5F1P4 ASH1L SCAMP3 CLK2 LOC100505728 SCARNA26B MSTO1 GON4L ARHGEF2 FDPS FAM189B SNORA80E KIAA0907 YY1AP1 RUSC1-AS1 SCARNA4 LOC105371451 ASH1L-AS1 RIT1 RUSC1 SYT11 MIR555 MSTO2P |
nsv952214 | Chr.1:155279610 - 155304509 on Build GRCh38 | Deletion | PKLR HCN3 |
nsv436027 | Chr.1:155260761 - 155291532 on Build GRCh38 | Insertion | PKLR HCN3 SCAMP3 CLK2 |
esv23319 | Chr.1:155257268 - 155292883 on Build GRCh38 | Gain | PKLR HCN3 SCAMP3 CLK2 |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | SLC50A1 PKLR MUC1 HCN3 FDPS FAM189B MTX1 TRIM46 MIR92B KRTCAP2 RUSC1-AS1 LOC105371451 GBA ASH1L DPM3 SCAMP3 RUSC1 EFNA1 GBAP1 CLK2 THBS3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |