Assay Details
Target Gene Details
Entrez Gene ID: | 81502 |
Gene Name: | histocompatibility minor 13 |
Gene Aliases: |
H13, IMP1, IMPAS, IMPAS-1, MSTP086, PSENL3, PSL3, SPP, SPPL1 |
Location: |
Chr.20:31514410-31569567 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HM13 | NM_030789.3 | 12 | 1524 | NP_110416.1 |
NM_178580.2 | 13 | 1727 | NP_848695.1 | |
NM_178581.2 | 13 | 1671 | NP_848696.1 | |
AF172086.1 | 12 | 1472 | AAQ13609.1 | |
AF483215.1 | 12 | 1470 | AAM22076.1 | |
AJ345029.1 | 12 | 1467 | CAC87790.1 | |
AK075283.1 | 12 | 1484 | BAC11519.1 | |
AY169310.1 | 13 | 1684 | AAO12535.1 | |
AY169311.1 | 12 | 1481 | AAO12536.1 | |
AY169312.1 | 13 | 1628 | AAO12537.1 | |
BC008938.2 | 12 | 1495 | AAH08938.1 | |
BC008959.2 | 12 | 1495 | AAH08959.1 | |
BC062595.1 | 12 | 1475 | AAH62595.1 | |
DQ168450.1 | 13 | 1679 |
Target Gene Details
Entrez Gene ID: | 100874042 |
Gene Name: | HM13 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.20:31567587-31573263 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HM13-AS1 | NR_046853.2 | |||
AJ710081.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv470546 | Chr.20:31245806 - 31647499 on Build GRCh38 | Gain | LINC00028 DEFB116 DEFB117 DEFB119 LOC107985416 MIR3193 DEFB123 DEFB121 COX4I2 REM1 DEFB122 HM13-AS1 DEFB118 DEFB115 HM13 DEFB124 ID1 |
esv2763228 | Chr.20:31247246 - 31651719 on Build GRCh38 | Gain | LINC00028 DEFB116 DEFB117 DEFB119 LOC107985416 MIR3193 DEFB123 DEFB121 COX4I2 REM1 DEFB122 HM13-AS1 DEFB118 DEFB115 HM13 DEFB124 ID1 |
dgv4300n100 | Chr.20:31247234 - 32033468 on Build GRCh38 | Gain | BCL2L1 DEFB116 DEFB119 LOC107985416 MYLK2 ABALON DEFB121 REM1 DEFB122 TTLL9 XKR7 HM13 PDRG1 FOXS1 LINC00028 DEFB117 MIR3193 DEFB123 DUSP15 COX4I2 HM13-AS1 DEFB118 DEFB115 TPX2 DEFB124 ID1 CCM2L |
esv3645652 | Chr.20:31500710 - 31576564 on Build GRCh38 | Gain | HM13-AS1 HM13 LOC107985416 |
nsv3345 | Chr.20:31549053 - 31593946 on Build GRCh38 | Deletion | HM13-AS1 HM13 LOC107985416 |
nsv458961 | Chr.20:31305698 - 31688103 on Build GRCh38 | Gain | BCL2L1 LINC00028 DEFB116 DEFB117 DEFB119 LOC107985416 MIR3193 DEFB123 DEFB121 COX4I2 REM1 DEFB122 HM13-AS1 DEFB118 HM13 DEFB124 ID1 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |