Assay Details
Target Gene Details
Entrez Gene ID: | 57657 |
Gene Name: | hyperpolarization activated cyclic nucleotide gated potassium channel 3 |
Gene Aliases: |
- |
Location: |
Chr.1:155277427-155289848 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HCN3 | NM_020897.2 | 8 | 2345 | NP_065948.1 |
NR_073074.1 | 8 | 2212 | ||
XM_011509816.2 | 8 | 2863 | XP_011508118.1 | |
XM_011509817.2 | 7 | 2183 | XP_011508119.1 | |
XM_011509818.2 | 7 | 1575 | XP_011508120.1 | |
XM_017001918.1 | 7 | 1557 | XP_016857407.1 | |
AB040968.2 | 8 | 1994 | BAA96059.2 | |
AF488550.1 | 8 | 2189 | AAO49470.1 | |
AK055840.1 | 7 | 2400 | ||
AK299333.1 | 8 | 2185 | ||
BC000066.1 | 7 | 1573 | AAH00066.1 | |
BC028024.1 | 5 | 1210 | AAH28024.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv3032 | Chr.1:155285619 - 155318185 on Build GRCh38 | Insertion | PKLR FDPS HCN3 LOC105371451 |
nsv831636 | Chr.1:155249432 - 155475073 on Build GRCh38 | Loss | RUSC1 PKLR RUSC1-AS1 FAM189B FDPS MIR555 HCN3 ASH1L SCAMP3 CLK2 POU5F1P4 LOC105371451 |
esv33869 | Chr.1:155253492 - 155948170 on Build GRCh38 | Loss | SCARNA4 SCARNA26A ASH1L-AS1 SNORA80E MSTO1 GON4L POU5F1P4 RIT1 ARHGEF2 FAM189B FDPS PKLR RUSC1-AS1 YY1AP1 ASH1L KIAA0907 SCARNA26B DAP3 RUSC1 LOC100505728 MIR555 HCN3 SYT11 RXFP4 SCAMP3 CLK2 MSTO2P LOC105371451 |
nsv952214 | Chr.1:155279610 - 155304509 on Build GRCh38 | Deletion | PKLR HCN3 |
nsv436027 | Chr.1:155260761 - 155291532 on Build GRCh38 | Insertion | PKLR HCN3 SCAMP3 CLK2 |
esv23319 | Chr.1:155257268 - 155292883 on Build GRCh38 | Gain | PKLR HCN3 SCAMP3 CLK2 |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | KRTCAP2 PKLR MIR92B EFNA1 RUSC1-AS1 MTX1 ASH1L MUC1 GBAP1 THBS3 TRIM46 RUSC1 SLC50A1 FAM189B FDPS HCN3 SCAMP3 CLK2 DPM3 GBA LOC105371451 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |