Assay Details
Target Gene Details
Entrez Gene ID: | 10752 |
Gene Name: | cell adhesion molecule L1 like |
Gene Aliases: |
CALL, L1CAM2 |
Location: |
Chr.3:196588-409417 on Build GRCh38 |
Assay Gene Location: | Within Exon 22 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CHL1 | NM_001253387.1 | 16 | 2533 | NP_001240316.1 |
NM_001253388.1 | 15 | 2033 | NP_001240317.1 | |
NM_006614.3 | 17 | 2581 | NP_006605.2 | |
XM_006712938.1 | 17 | 2192 | XP_006713001.1 | |
XM_006712939.3 | 16 | 2509 | XP_006713002.1 | |
XM_006712940.3 | 16 | 2423 | XP_006713003.1 | |
XM_011533292.1 | 17 | 2562 | XP_011531594.1 | |
XM_011533294.1 | 16 | 2144 | XP_011531596.1 | |
XM_011533295.1 | 16 | 2514 | XP_011531597.1 | |
XM_011533296.1 | 17 | 2192 | XP_011531598.1 | |
XM_017005566.1 | 18 | 7086 | XP_016861055.1 | |
XM_017005567.1 | 16 | 2294 | XP_016861056.1 | |
XM_017005568.1 | 16 | 2101 | XP_016861057.1 | |
XM_017005569.1 | 15 | 2461 | XP_016861058.1 | |
XM_017005570.1 | 15 | 2375 | XP_016861059.1 | |
XM_017005571.1 | 15 | 2246 | XP_016861060.1 | |
XM_017005572.1 | 17 | 2589 | XP_016861061.1 | |
XM_017005573.1 | 16 | 2509 | XP_016861062.1 | |
AB209329.1 | 16 | 2358 | BAD92566.1 | |
AF002246.1 | 17 | 2210 | AAB60937.1 | |
AK126878.1 | 16 | 2512 | ||
BC104918.1 | 14 | 1922 | AAI04919.1 | |
BC143496.1 | 14 | 1919 |
Target Gene Details
Entrez Gene ID: | 101927193 |
Gene Name: | CHL1 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.3:363373-385795 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CHL1-AS1 | NR_110739.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1010970 | Chr.3:188327 - 1623352 on Build GRCh38 | Gain |
![]() ![]() ![]() ![]() ![]() |
esv2759122 | Chr.3:29482 - 756820 on Build GRCh38 | Gain+Loss |
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nsv526340 | Chr.3:21733 - 2305176 on Build GRCh38 | Loss |
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esv3594901 | Chr.3:328751 - 540780 on Build GRCh38 | Gain |
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esv2667629 | Chr.3:39576 - 1039187 on Build GRCh38 | Deletion |
![]() ![]() ![]() ![]() ![]() |
nsv589291 | Chr.3:278518 - 1087112 on Build GRCh38 | Loss |
![]() ![]() ![]() ![]() |
nsv589293 | Chr.3:356048 - 433324 on Build GRCh38 | Loss |
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nsv1005290 | Chr.3:247092 - 949319 on Build GRCh38 | Loss |
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nsv834589 | Chr.3:235505 - 395503 on Build GRCh38 | Gain |
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dgv4608n100 | Chr.3:18655 - 438490 on Build GRCh38 | Gain |
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nsv1015041 | Chr.3:359178 - 529515 on Build GRCh38 | Gain |
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esv2763731 | Chr.3:243604 - 1386714 on Build GRCh38 | Gain+Loss |
![]() ![]() ![]() ![]() |
nsv1004600 | Chr.3:244100 - 607771 on Build GRCh38 | Loss |
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dgv4613n100 | Chr.3:52474 - 1799230 on Build GRCh38 | Loss |
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nsv589242 | Chr.3:47730 - 388999 on Build GRCh38 | Gain |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)