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Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:971335 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01803198_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
XM_017002478.1 XP_016857967.1
XM_017002479.1 XP_016857968.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain AGRN LOC107985728 ISG15 LOC100288175 HES4 PERM1 LOC105378948 LOC100130417 RNF223 C1orf159 PLEKHN1 SAMD11 KLHL17 LOC284600 NOC2L
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss AGRN FAM87B AURKAIP1 CPTP OR4F29 MIR6726 PUSL1 MIR6859-2 CPSF3L TNFRSF18 LOC100134822 LOC105378947 LOC100506504 RNF223 LOC148413 TTLL10 MMP23B LOC105378592 TNFRSF4 FAAP20 LOC100287934 HES4 PERM1 LOC100132287 OR4F16 LOC100130417 FAM132A MIR429 ATAD3A ATAD3C MIR6859-1 LOC105378591 SLC35E2B WASH7P PRKCZ MXRA8 LOC284600 NOC2L LOC100129534 ACAP3 ISG15 DVL1 MIR6723 ATAD3B LINC01128 C1orf159 VWA1 CFAP74 NADK LOC102725121 MIR6727 MIB2 MIR1302-2 TMEM240 TMEM52 MIR200B SLC35E2 CDK11B SAMD11 TMEM88B MRPL20 FNDC10 LOC107985728 MIR6808 TTLL10-AS1 LOC100288175 LOC100288069 LOC100133331 LOC107985729 TAS1R3 FAM138A OR4F5 LOC101928626 KLHL17 MMP23A LOC105378589 SDF4 LOC102724312 LINC01342 MIR200A LOC105378948 FAM41C LOC107984841 PLEKHN1 GABRD MTND2P28 CDK11A ANKRD65 SSU72 CALML6 MTND1P23 LOC729737 MORN1 B3GALT6 LINC00115 UBE2J2 SCNN1D DDX11L1 LOC105378949 SKI GNB1 CCNL2
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion AGRN LOC107985728 ISG15 LOC100288175 HES4 PERM1 LOC105378948 LOC100130417 RNF223 C1orf159 PLEKHN1 SAMD11 KLHL17 LOC284600 NOC2L
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion PERM1 LOC100130417 LOC107985728 PLEKHN1 SAMD11 KLHL17 LOC284600 NOC2L
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain AGRN SDF4 LINC01342 MIR200A TNFRSF18 LOC105378948 MIR200B FAM41C RNF223 PLEKHN1 TTLL10 SAMD11 LOC284600 NOC2L TNFRSF4 LOC107985728 TTLL10-AS1 ISG15 LOC100288175 HES4 PERM1 LOC100130417 MIR429 C1orf159 KLHL17
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss AGRN FAM87B AURKAIP1 CPTP MIR6726 PUSL1 NADK MIR6727 MIB2 TMEM240 CPSF3L TNFRSF18 MIR200B SLC35E2 RNF223 CDK11B LOC148413 TTLL10 SAMD11 MMP23B TMEM88B MRPL20 FNDC10 TNFRSF4 LOC107985728 MIR6808 TTLL10-AS1 LOC100287934 LOC100288175 HES4 LOC100288069 PERM1 LOC107985729 TAS1R3 LOC100130417 FAM132A MIR429 KLHL17 ATAD3A MMP23A ATAD3C SDF4 LOC102724312 LINC01342 SLC35E2B MIR200A LOC105378948 FAM41C PLEKHN1 MXRA8 LOC284600 NOC2L ACAP3 CDK11A ANKRD65 SSU72 ISG15 DVL1 B3GALT6 ATAD3B LINC00115 LINC01128 UBE2J2 SCNN1D C1orf159 VWA1 CCNL2
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain AGRN FAM87B LOC105378948 FAM41C LOC107984841 LOC105378947 RNF223 PLEKHN1 SAMD11 MTND2P28 LOC284600 NOC2L LOC107985728 LOC100287934 ISG15 MTND1P23 LOC100288175 MIR6723 HES4 LOC100288069 LOC100133331 LINC00115 LINC01128 PERM1 OR4F16 LOC100130417 C1orf159 LOC101928626 KLHL17
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss AGRN FAM87B SDF4 LINC01342 MIR200A TNFRSF18 LOC105378948 MIR200B FAM41C RNF223 PLEKHN1 TTLL10 SAMD11 LOC284600 NOC2L TNFRSF4 LOC107985728 TTLL10-AS1 ISG15 LOC100288175 HES4 B3GALT6 LINC00115 LINC01128 UBE2J2 PERM1 LOC100130417 FAM132A MIR429 C1orf159 KLHL17
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain AGRN ISG15 LOC100288175 HES4 LINC01342 PERM1 LOC105378948 RNF223 C1orf159 PLEKHN1 SAMD11 KLHL17 NOC2L
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion AGRN TNFRSF4 TTLL10-AS1 SDF4 ISG15 LOC100288175 HES4 LINC01342 PERM1 MIR200A TNFRSF18 LOC105378948 MIR200B MIR429 RNF223 C1orf159 PLEKHN1 TTLL10 SAMD11 KLHL17 NOC2L
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss AGRN PERM1 LOC100130417 LOC107985728 ISG15 PLEKHN1 SAMD11 HES4 KLHL17 LOC284600 NOC2L
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain AGRN AURKAIP1 CPTP MIR6726 SDF4 PUSL1 MIR6727 LINC01342 MIR200A CPSF3L TNFRSF18 LOC105378948 MIR200B RNF223 LOC148413 PLEKHN1 TTLL10 MXRA8 SAMD11 TMEM88B LOC284600 NOC2L ACAP3 MRPL20 TNFRSF4 LOC107985728 MIR6808 ANKRD65 TTLL10-AS1 ISG15 DVL1 LOC100288175 HES4 B3GALT6 UBE2J2 PERM1 TAS1R3 LOC100130417 FAM132A SCNN1D MIR429 C1orf159 KLHL17 CCNL2
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LINC01128 PERM1 LOC100130417 LOC107985728 FAM41C PLEKHN1 SAMD11 HES4 KLHL17 LOC284600 NOC2L

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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