Assay Details
Target Gene Details
Entrez Gene ID: | 5820 |
Gene Name: | Pvt1 oncogene (non-protein coding) |
Gene Aliases: |
LINC00079, MYC, NCRNA00079, onco-lncRNA-100 |
Location: |
Chr.8:127794533-128101253 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PVT1 | NR_003367.3 |
Target Gene Details
Entrez Gene ID: | 641384 |
Gene Name: | transmembrane protein 75 |
Gene Aliases: |
- |
Location: |
Chr.8:127946559-127948723 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TMEM75 | NR_103558.1 | 1 | 1237 | |
AK093424.1 | 1 | 1237 | ||
AX748117.1 | 1 | 1237 | ||
BC137383.1 | 1 | 859 | ||
BC137385.1 | 1 | 859 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3618786 | Chr.8:127938660 - 127947834 on Build GRCh38 | Loss | PVT1 TMEM75 |
nsv524801 | Chr.8:127943179 - 127953306 on Build GRCh38 | Loss | PVT1 TMEM75 |
More Information
Additional Information:
For this assay, SNP(s) [rs73353791] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |