Assay Details
Target Gene Details
Entrez Gene ID: | 1942 |
Gene Name: | ephrin A1 |
Gene Aliases: |
B61, ECKLG, EFL1, EPLG1, LERK-1, LERK1, TNFAIP4 |
Location: |
Chr.1:155127873-155134910 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
EFNA1 | NM_004428.2 | 2 | 417 | NP_004419.2 |
NM_182685.1 | 2 | 417 | NP_872626.1 | |
AK057845.1 | 2 | 830 | ||
AK289589.1 | 2 | 414 | ||
AK308965.1 | ||||
AK311677.1 | ||||
AK313117.1 | 2 | 461 | ||
AL833641.1 | 2 | 415 | ||
BC032698.1 | 2 | 410 | AAH32698.1 | |
BC095432.1 | 2 | 399 | AAH95432.1 | |
CR457416.1 | 2 | 312 | CAG33697.1 | |
M57730.1 | 2 | 385 | AAA58388.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509502 | Chr.1:154904407 - 155142291 on Build GRCh38 | Insertion | PMVK ADAM15 LOC100505666 DCST2 SLC50A1 FLAD1 EFNA3 PYGO2 LENEP ZBTB7B LOC101928120 SHC1 DCST1 PBXIP1 DPM3 EFNA4 EFNA1 CKS1B MIR4258 |
nsv547961 | Chr.1:155109822 - 155225189 on Build GRCh38 | Loss | KRTCAP2 THBS3 MIR92B MTX1 SLC50A1 DPM3 MUC1 EFNA1 TRIM46 GBAP1 |
nsv998756 | Chr.1:155107614 - 155164069 on Build GRCh38 | Gain | SLC50A1 DPM3 EFNA1 |
esv3587615 | Chr.1:155047853 - 155175013 on Build GRCh38 | Gain | KRTCAP2 ADAM15 LOC100505666 SLC50A1 DCST1 EFNA3 DPM3 EFNA4 EFNA1 TRIM46 |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | KRTCAP2 FDPS SLC50A1 HCN3 ASH1L GBA LOC105371451 SCAMP3 TRIM46 RUSC1 GBAP1 THBS3 MIR92B MTX1 CLK2 RUSC1-AS1 DPM3 PKLR FAM189B MUC1 EFNA1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |