Assay Details
Target Gene Details
Entrez Gene ID: | 27043 |
Gene Name: | proline, glutamate and leucine rich protein 1 |
Gene Aliases: |
MNAR, P160 |
Location: |
Chr.17:4671384-4704337 on Build GRCh38 |
Assay Gene Location: | Within Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PELP1 | NM_001278241.1 | 17 | 2427 | NP_001265170.1 |
NM_014389.2 | 16 | 2345 | NP_055204.3 | |
AF547989.1 | 16 | 2119 | AAN41255.1 | |
AK226056.1 | 16 | 2125 | ||
AK291163.1 | 16 | 2145 | ||
AK293838.1 | 17 | 2214 | ||
AK299084.1 | 16 | 2333 | ||
AY882602.1 | 16 | 1912 | AAW80659.1 | |
BC002875.2 | 6 | 960 | AAH02875.2 | |
BC010457.2 | 15 | 1873 | AAH10457.2 | |
BC069058.1 | 16 | 2119 | AAH69058.1 | |
U88153.2 | 15 | 2554 | AAC17708.2 | |
U88154.1 | 15 | 1770 | AAC17709.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | ZMYND15 LOC400568 SMTNL2 KIF1C CAMTA2 GLTPD2 NUP88 C1QBP USP6 MIR6864 C17orf107 VMO1 MINK1 ZFP3 CXCL16 PFN1 SPAG7 CHRNE ALOX15 ZNF594 LOC100130950 TM4SF5 LOC101559451 PLD2 LOC101927979 LOC101928000 RPAIN RABEP1 SLC25A11 ARRB2 DHX33 INCA1 SLC52A1 MIR6865 PELP1 ENO3 LOC102724009 LOC107984973 SCIMP ZNF232 MED11 GP1BA PSMB6 RNF167 |
nsv833346 | Chr.17:4646256 - 4860871 on Build GRCh38 | Loss | ZMYND15 TM4SF5 LOC101559451 PLD2 ARRB2 GLTPD2 PELP1 LOC107984973 MED11 VMO1 MINK1 CXCL16 PSMB6 |
More Information
Additional Information:
For this assay, SNP(s) [rs147763003] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |