Assay Details
Target Gene Details
Entrez Gene ID: | 124565 |
Gene Name: | solute carrier family 38 member 10 |
Gene Aliases: |
PP1744 |
Location: |
Chr.17:81244811-81295433 on Build GRCh38 |
Assay Gene Location: | Within Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC38A10 | NM_001037984.2 | 16 | 3307 | NP_001033073.1 |
XM_005257019.1 | 17 | 3425 | XP_005257076.1 | |
XM_011524288.1 | 17 | 3446 | XP_011522590.1 | |
XM_011524289.1 | 16 | 3422 | XP_011522591.1 | |
XM_011524290.1 | 15 | 2701 | XP_011522592.1 | |
BI194553.1 | 1 | 68 | ||
BU552914.1 | 1 | 644 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv2161 | Chr.17:81238081 - 81282084 on Build GRCh38 | Insertion | C17orf89 SLC38A10 TEPSIN |
esv26223 | Chr.17:80659041 - 81736487 on Build GRCh38 | Gain+Loss | MIR6786 TMEM105 C17orf89 SLC38A10 RPTOR MIR3186 CEP131 PDE6G MIR657 FSCN2 BAHCC1 HGS MIR1250 CHMP6 LOC107985022 TEPSIN LOC400627 BAIAP2 LOC100130370 AATK-AS1 CCDC137 NPLOC4 ARL16 MIR3065 LOC105371921 ACTG1 MIR338 LOC101928855 SLC25A10 LOC100129503 BAIAP2-AS1 LINC00482 MRPL12 MIR4740 LOC107985021 LOC105371925 OXLD1 AATK FAAP100 TSPAN10 |
esv3893051 | Chr.17:81244320 - 81272804 on Build GRCh38 | Gain | SLC38A10 |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | NARF PCYT2 ASPSCR1 C17orf62 SLC38A10 STRA13 CEP131 PDE6G HEXDC SNORD134 PPP1R27 ALYREF CSNK1D MYADML2 MIR6787 MCRIP1 TEPSIN LOC100130370 LOC105376790 LOC105371944 ARL16 RFNG ACTG1 ARHGDIA SLC25A10 ZNF750 LOC105376791 SLC16A3 SECTM1 MRPL12 DCXR FASN ANAPC11 TSPAN10 FN3K TBCD MIR6786 RAB40B TMEM105 C17orf89 P4HB B3GNTL1 MIR3186 PYCR1 FSCN2 BAHCC1 HGS WDR45B MAFG LOC101929552 LOC101929511 MAFG-AS1 RAC3 SIRT7 CCDC57 AATK-AS1 CCDC137 NPLOC4 NOTUM UTS2R GPS1 CD7 LRRC45 OGFOD3 NPB GCGR FOXK2 MIR4525 LINC00482 MIR4740 FN3KRP LOC105371925 OXLD1 AATK FAAP100 DUS1L TEX19 |
dgv46n68 | Chr.17:81133921 - 81288932 on Build GRCh38 | Loss | C17orf89 SLC38A10 LOC105371925 CEP131 TEPSIN AATK AATK-AS1 |
nsv457971 | Chr.17:81216762 - 81282974 on Build GRCh38 | Loss | C17orf89 SLC38A10 LOC105371925 CEP131 TEPSIN |
nsv470619 | Chr.17:81032233 - 81349843 on Build GRCh38 | Loss | TMEM105 C17orf89 MIR3065 SLC38A10 MIR338 CEP131 MIR657 MIR1250 BAIAP2-AS1 LINC00482 LOC105371925 TEPSIN BAIAP2 AATK AATK-AS1 |
nsv1160499 | Chr.17:81235307 - 81320655 on Build GRCh38 | Deletion | TMEM105 C17orf89 LINC00482 SLC38A10 TEPSIN |
nsv1064123 | Chr.17:81168449 - 81282457 on Build GRCh38 | Gain | C17orf89 SLC38A10 LOC105371925 CEP131 TEPSIN AATK-AS1 |
nsv952389 | Chr.17:81137501 - 81593774 on Build GRCh38 | Deletion | NPLOC4 TMEM105 C17orf89 SLC38A10 ACTG1 MIR3186 CEP131 FSCN2 BAHCC1 LINC00482 MIR4740 LOC105371925 TEPSIN AATK LOC100130370 AATK-AS1 FAAP100 |
nsv509677 | Chr.17:81227139 - 81267309 on Build GRCh38 | Insertion | C17orf89 SLC38A10 LOC105371925 TEPSIN |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |